Difference between revisions of "Tiso gene 8988"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.180-RXN 2.3.1.180-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-(acyl-car...")
(Created page with "Category:Gene == Gene Tiso_gene_8988 == * right end position: ** 1086 * transcription direction: ** POSITIVE * left end position: ** 505 * centisome position: ** 5.1965427...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.180-RXN 2.3.1.180-RXN] ==
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== Gene Tiso_gene_8988 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 1086
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* common name:
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* transcription direction:
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** 3-oxoacyl-(acyl-carrier-protein)_synthase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.3.1.180 EC-2.3.1.180]
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** 505
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* centisome position:
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** 5.1965427   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.1.1.274-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[ACETYL-COA]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[Acetoacetyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 acetyl-CoA[c] '''=>''' 1 coenzyme A[c] '''+''' 1 an acetoacetyl-[acp][c] '''+''' 1 CO2[c]
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* Reaction: [[ALDEHYDE-REDUCTASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-12078]]
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* Gene: [[Tiso_gene_15991]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14102]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-8772]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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* Reaction: [[RXN-8773]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-4381]], fatty acid biosynthesis initiation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4381 PWY-4381]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-5515]]
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* [[PWY-5516]]
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* [[PWY-6693]]
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* [[PWY-7165]]
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* [[KETOGLUCONMET-PWY]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=1086}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12083 12083]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=505}}
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{{#set: common name=3-oxoacyl-(acyl-carrier-protein)_synthase}}
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{{#set: centisome position=5.1965427    }}
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{{#set: ec number=EC-2.3.1.180}}
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{{#set: reaction associated=1.1.1.274-RXN|ALDEHYDE-REDUCTASE-RXN|RXN-12078|RXN-14102|RXN-8772|RXN-8773}}
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{{#set: gene associated=Tiso_gene_15991}}
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{{#set: pathway associated=PWY-5515|PWY-5516|PWY-6693|PWY-7165|KETOGLUCONMET-PWY}}
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{{#set: in pathway=PWY-4381}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:42, 21 March 2018

Gene Tiso_gene_8988

  • right end position:
    • 1086
  • transcription direction:
    • POSITIVE
  • left end position:
    • 505
  • centisome position:
    • 5.1965427
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8988&oldid=43303"