Difference between revisions of "Tiso gene 91"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-171 RXN1G-171] == * direction: ** LEFT-TO-RIGHT * common name: ** trans-delta2-cis-delta5-C24...")
(Created page with "Category:Gene == Gene Tiso_gene_91 == * right end position: ** 19771 * transcription direction: ** POSITIVE * left end position: ** 18607 * centisome position: ** 41.15773...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-171 RXN1G-171] ==
+
== Gene Tiso_gene_91 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 19771
−
* common name:
+
* transcription direction:
−
** trans-delta2-cis-delta5-C24:2-[acyl-carrier protein] reductase (NADH, B-specific)
+
** POSITIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/1.3.1.M4 EC-1.3.1.M4]
+
** 18607
 +
* centisome position:
 +
** 41.157734   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN]]
−
** 1 [[PROTON]][c] '''+''' 1 [[trans-D2-cis-D5-lignoceroyl-ACPs]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[cis-delta5-lignoceroyl-ACPs]][c] '''+''' 1 [[NAD]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: automated-name-match
−
** 1 H+[c] '''+''' 1 a trans-delta2-cis-delta5-C24:2-[acp][c] '''+''' 1 NADH[c] '''=>''' 1 a cis-delta5-C24:1-[acp][c] '''+''' 1 NAD+[c]
+
* Reaction: [[6PGLUCONDEHYDROG-RXN]]
−
 
+
** Source: [[orthology-esiliculosus]]
−
== Genes associated with this reaction  ==
+
* Reaction: [[GLYCLTD]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** Source: [[orthology-creinhardtii]]
−
* [[Tiso_gene_10778]]
+
* Reaction: [[GLYCOLATE-REDUCTASE-RXN]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-experimental_annotation]]
−
== Pathways ==
+
*** Assignment: automated-name-match
−
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
+
* Reaction: [[GLYOXYLATE-REDUCTASE-NADP+-RXN]]
−
** '''86''' reactions found over '''182''' reactions in the full pathway
+
** Source: [[annotation-in-silico_annotation]]
−
== Reconstruction information  ==
+
*** Assignment: ec-number
−
* [[orthology]]:
+
** Source: [[annotation-experimental_annotation]]
−
** [[pantograph]]:
+
*** Assignment: ec-number
−
*** [[esiliculosus]]
+
* Reaction: [[RXN-6903]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-9952]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN0-5289]]
 +
** Source: [[orthology-creinhardtii]]
 +
* Reaction: [[SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: automated-name-match
 +
== Pathways associated ==
 +
* [[PWY-4321]]
 +
* [[GLUDEG-I-PWY]]
 +
* [[OXIDATIVEPENT-PWY]]
 +
* [[PWY-7295]]
 +
* [[PWY-7294]]
 +
* [[PWY-5022]]
 +
* [[PWY-6473]]
 +
* [[PWY-6535]]
 +
* [[PWY-5677]]
 +
* [[GLYCOLATEMET-PWY]]
 +
* [[P122-PWY]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=19771}}
−
{{#set: common name=trans-delta2-cis-delta5-C24:2-[acyl-carrier protein] reductase (NADH, B-specific)}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: ec number=EC-1.3.1.M4}}
+
{{#set: left end position=18607}}
−
{{#set: gene associated=Tiso_gene_10778}}
+
{{#set: centisome position=41.157734    }}
−
{{#set: in pathway=PWYG-321}}
+
{{#set: reaction associated=4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN|6PGLUCONDEHYDROG-RXN|GLYCLTD|GLYCOLATE-REDUCTASE-RXN|GLYOXYLATE-REDUCTASE-NADP+-RXN|RXN-6903|RXN-9952|RXN0-5289|SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: pathway associated=PWY-4321|GLUDEG-I-PWY|OXIDATIVEPENT-PWY|PWY-7295|PWY-7294|PWY-5022|PWY-6473|PWY-6535|PWY-5677|GLYCOLATEMET-PWY|P122-PWY}}
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+

Latest revision as of 20:40, 21 March 2018

Gene Tiso_gene_91

  • right end position:
    • 19771
  • transcription direction:
    • POSITIVE
  • left end position:
    • 18607
  • centisome position:
    • 41.157734
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_91&oldid=43139"