Difference between revisions of "Tiso gene 9179"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=TETRADECANOYL-COA TETRADECANOYL-COA] == * smiles: ** CCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGININE--TRNA-LIGASE-RXN ARGININE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=TETRADECANOYL-COA TETRADECANOYL-COA] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGININE--TRNA-LIGASE-RXN ARGININE--TRNA-LIGASE-RXN] ==
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* smiles:
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* direction:
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** CCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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−
** InChIKey=DUAFKXOFBZQTQE-QSGBVPJFSA-J
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* common name:
 
* common name:
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** myristoyl-CoA
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** arginyl-trna_synthetase
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* molecular weight:
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** arginine-trna_ligase
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** 973.861   
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* ec number:
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** [http://enzyme.expasy.org/EC/6.1.1.19 EC-6.1.1.19]
 
* Synonym(s):
 
* Synonym(s):
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** Tetradecanoyl-CoA (n-C14:0CoA)
 
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** tetradecanoyl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-17021]]
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* With identifiers:
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* [[RXN-14131]]
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** 1 [[ARG-tRNAs]][c] '''+''' 1 [[ARG]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Charged-ARG-tRNAs]][c] '''+''' 1 [[AMP]][c]
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* [[ACACT7m]]
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* With common name(s):
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* [[RXN-17023]]
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** 1 a tRNAarg[c] '''+''' 1 L-arginine[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 an L-arginyl-[tRNAarg][c] '''+''' 1 AMP[c]
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* [[ACOA140or]]
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== Reaction(s) known to produce the compound ==
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== Genes associated with this reaction  ==
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* [[2.3.1.155-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) of unknown directionality ==
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* [[Tiso_gene_16360]]
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* [[2.3.1.97-RXN]]
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** IN-SILICO_ANNOTATION
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* [[ACACT7]]
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***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12997]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
 +
** '''21''' reactions found over '''21''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
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*** [[esiliculosus]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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* BIGG : tdcoa
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20301 20301]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25244582 25244582]
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* LIGAND-RXN:
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* HMDB : HMDB01521
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** [http://www.genome.jp/dbget-bin/www_bget?R03646 R03646]
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* LIGAND-CPD:
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* UNIPROT:
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** [http://www.genome.jp/dbget-bin/www_bget?C02593 C02593]
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** [http://www.uniprot.org/uniprot/P40329 P40329]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P35868 P35868]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57385 57385]
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** [http://www.uniprot.org/uniprot/P43832 P43832]
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* METABOLIGHTS : MTBLC57385
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** [http://www.uniprot.org/uniprot/O51540 O51540]
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{{#set: smiles=CCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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** [http://www.uniprot.org/uniprot/O67068 O67068]
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{{#set: inchi key=InChIKey=DUAFKXOFBZQTQE-QSGBVPJFSA-J}}
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** [http://www.uniprot.org/uniprot/O59147 O59147]
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{{#set: common name=myristoyl-CoA}}
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** [http://www.uniprot.org/uniprot/O83803 O83803]
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{{#set: molecular weight=973.861    }}
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** [http://www.uniprot.org/uniprot/Q9ZE81 Q9ZE81]
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{{#set: common name=Tetradecanoyl-CoA (n-C14:0CoA)|tetradecanoyl-CoA}}
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** [http://www.uniprot.org/uniprot/Q9PNC0 Q9PNC0]
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{{#set: consumed by=RXN-17021|RXN-14131|ACACT7m|RXN-17023|ACOA140or}}
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** [http://www.uniprot.org/uniprot/Q9X0H8 Q9X0H8]
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{{#set: produced by=2.3.1.155-RXN}}
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** [http://www.uniprot.org/uniprot/P46906 P46906]
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{{#set: consumed or produced by=2.3.1.97-RXN|ACACT7}}
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** [http://www.uniprot.org/uniprot/Q57689 Q57689]
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** [http://www.uniprot.org/uniprot/O27496 O27496]
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** [http://www.uniprot.org/uniprot/Q9JTM7 Q9JTM7]
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** [http://www.uniprot.org/uniprot/Q9CE12 Q9CE12]
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** [http://www.uniprot.org/uniprot/P56128 P56128]
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** [http://www.uniprot.org/uniprot/P47618 P47618]
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** [http://www.uniprot.org/uniprot/Q9ZMB9 Q9ZMB9]
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** [http://www.uniprot.org/uniprot/Q08888 Q08888]
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** [http://www.uniprot.org/uniprot/P54136 P54136]
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** [http://www.uniprot.org/uniprot/P38714 P38714]
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** [http://www.uniprot.org/uniprot/Q05506 Q05506]
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** [http://www.uniprot.org/uniprot/P75222 P75222]
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** [http://www.uniprot.org/uniprot/P11875 P11875]
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** [http://www.uniprot.org/uniprot/O23247 O23247]
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** [http://www.uniprot.org/uniprot/O74781 O74781]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=arginyl-trna_synthetase}}
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{{#set: common name=arginine-trna_ligase}}
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{{#set: ec number=EC-6.1.1.19}}
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{{#set: gene associated=Tiso_gene_16360|Tiso_gene_12997}}
 +
{{#set: in pathway=TRNA-CHARGING-PWY}}
 +
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 17:55, 10 January 2018

Reaction ARGININE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • arginyl-trna_synthetase
    • arginine-trna_ligase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a tRNAarg[c] + 1 L-arginine[c] + 1 ATP[c] => 1 diphosphate[c] + 1 an L-arginyl-[tRNAarg][c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links







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