Difference between revisions of "Tiso gene 9916"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPHINGANINE-KINASE-RXN SPHINGANINE-KINASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [ht...")
 
(Created page with "Category:Gene == Gene Tiso_gene_9916 == * Synonym(s): == Reactions associated == * Reaction: ADPREDUCT-RXN ** Source: annotation-in-silico_annotation *** Assignme...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPHINGANINE-KINASE-RXN SPHINGANINE-KINASE-RXN] ==
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== Gene Tiso_gene_9916 ==
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* direction:
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** LEFT-TO-RIGHT
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.1.91 EC-2.7.1.91]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ADPREDUCT-RXN]]
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** 1 [[CPD-13612]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-649]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 D-erythro-sphinganine[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 sphinganine 1-phosphate[c]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-synechocystis]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[CDPREDUCT-RXN]]
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* [[Tiso_gene_14560]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[creinhardtii]]
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*** Assignment: ec-number
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* [[Tiso_gene_1163]]
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** Source: [[orthology-athaliana]]
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** [[pantograph]]-[[creinhardtii]]
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** Source: [[orthology-synechocystis]]
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== Pathways  ==
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** Source: [[orthology-esiliculosus]]
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* [[PWY-5129]], sphingolipid biosynthesis (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5129 PWY-5129]
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* Reaction: [[GDPREDUCT-RXN]]
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** '''3''' reactions found over '''13''' reactions in the full pathway
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-7119]], sphingolipid recycling and degradation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7119 PWY-7119]
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*** Assignment: ec-number
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** '''5''' reactions found over '''11''' reactions in the full pathway
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** Source: [[orthology-athaliana]]
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== Reconstruction information  ==
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** Source: [[orthology-synechocystis]]
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* [[orthology]]:
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** Source: [[orthology-esiliculosus]]
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** [[pantograph]]:
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* Reaction: [[RIBONUCLEOSIDE-DIP-REDUCTI-RXN]]
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*** [[creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RIBONUCLEOSIDE-DIP-REDUCTII-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN0-722]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN0-747]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN0-748]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[UDPREDUCT-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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* [[PWY-7210]]
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* [[PWY-7198]]
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* [[PWY-7220]]
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* [[PWY-7184]]
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* [[PWY-7222]]
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* [[PWY0-166]]
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* [[PWY-7227]]
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* [[PWY-7226]]
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* [[PWY-6545]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: reaction associated=ADPREDUCT-RXN|CDPREDUCT-RXN|GDPREDUCT-RXN|RIBONUCLEOSIDE-DIP-REDUCTI-RXN|RIBONUCLEOSIDE-DIP-REDUCTII-RXN|RXN0-722|RXN0-747|RXN0-748|UDPREDUCT-RXN}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15465 15465]
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{{#set: pathway associated=PWY-7210|PWY-7198|PWY-7220|PWY-7184|PWY-7222|PWY0-166|PWY-7227|PWY-7226|PWY-6545}}
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R02976 R02976]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-2.7.1.91}}
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{{#set: gene associated=Tiso_gene_14560|Tiso_gene_1163}}
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{{#set: in pathway=PWY-5129|PWY-7119}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii}}
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Latest revision as of 21:22, 21 March 2018

Gene Tiso_gene_9916

  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_9916&oldid=48167"