Difference between revisions of "Tiso gene 9922"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-7008 RXN0-7008] == * direction: ** LEFT-TO-RIGHT * common name: ** proline_dehydrogenase * ec...")
(Created page with "Category:Gene == Gene Tiso_gene_9922 == * right end position: ** 6446 * transcription direction: ** NEGATIVE * left end position: ** 4457 * centisome position: ** 49.67123...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-7008 RXN0-7008] ==
+
== Gene Tiso_gene_9922 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 6446
−
* common name:
+
* transcription direction:
−
** proline_dehydrogenase
+
** NEGATIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/1.5.5.2 EC-1.5.5.2]
+
** 4457
 +
* centisome position:
 +
** 49.671234   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[3PGAREARR-RXN]]
−
** 1 [[PRO]][c] '''+''' 1 [[Ubiquinones]][c] '''=>''' 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 1 [[Ubiquinols]][c] '''+''' 1 [[PROTON]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 L-proline[c] '''+''' 1 a ubiquinone[c] '''=>''' 1 (S)-1-pyrroline-5-carboxylate[c] '''+''' 1 an ubiquinol[c] '''+''' 1 H+[c]
+
* Reaction: [[RXN-15509]]
−
 
+
** Source: [[annotation-in-silico_annotation]]
−
== Genes associated with this reaction  ==
+
*** Assignment: ec-number
−
Genes have been associated with this reaction based on different elements listed below.
+
* Reaction: [[RXN-15510]]
−
* Gene: [[Tiso_gene_18825]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: ec-number
−
* Gene: [[Tiso_gene_18826]]
+
* Reaction: [[RXN-15511]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: ec-number
−
* Gene: [[Tiso_gene_9762]]
+
* Reaction: [[RXN-15512]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: ec-number
−
** Source: [[orthology-esiliculosus]]
+
* Reaction: [[RXN-15513]]
−
== Pathways  ==
+
−
* [[PWY0-1544]], proline to cytochrome bo oxidase electron transfer: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1544 PWY0-1544]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
== Pathways associated ==
 +
* [[PWY-1042]]
 +
* [[P341-PWY]]
 +
* [[PWY-2221]]
 +
* [[PWY-1622]]
 +
* [[GLUCONEO-PWY]]
 +
* [[GLYCOLYSIS]]
 +
* [[PWY-6901]]
 +
* [[ANAGLYCOLYSIS-PWY]]
 +
* [[PWY-7218]]
 +
* [[PWY-6405]]
 +
* [[P124-PWY]]
 +
* [[PWY-6886]]
 +
* [[PWY66-399]]
 +
* [[PWY-5723]]
 +
* [[PWY-6142]]
 +
* [[PWY-5484]]
 +
* [[PWY-7124]]
 +
* [[P122-PWY]]
 +
* [[PWY-7003]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=6446}}
−
{{#set: common name=proline_dehydrogenase}}
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: ec number=EC-1.5.5.2}}
+
{{#set: left end position=4457}}
−
{{#set: gene associated=Tiso_gene_18825|Tiso_gene_18826|Tiso_gene_9762}}
+
{{#set: centisome position=49.671234    }}
−
{{#set: in pathway=PWY0-1544}}
+
{{#set: reaction associated=3PGAREARR-RXN|RXN-15509|RXN-15510|RXN-15511|RXN-15512|RXN-15513}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: pathway associated=PWY-1042|P341-PWY|PWY-2221|PWY-1622|GLUCONEO-PWY|GLYCOLYSIS|PWY-6901|ANAGLYCOLYSIS-PWY|PWY-7218|PWY-6405|P124-PWY|PWY-6886|PWY66-399|PWY-5723|PWY-6142|PWY-5484|PWY-7124|P122-PWY|PWY-7003}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:40, 21 March 2018

Gene Tiso_gene_9922

  • right end position:
    • 6446
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 4457
  • centisome position:
    • 49.671234
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_9922&oldid=43150"