Difference between revisions of "Tiso gene 9927"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13008 RXN-13008] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** 3-ox...")
 
(Created page with "Category:Gene == Gene Tiso_gene_9927 == * right end position: ** 8917 * transcription direction: ** POSITIVE * left end position: ** 6396 * centisome position: ** 71.28051...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13008 RXN-13008] ==
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== Gene Tiso_gene_9927 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 8917
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* common name:
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* transcription direction:
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** polyketide_synthase
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** POSITIVE
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** 3-oxoacyl-(acyl-carrier-protein)
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* left end position:
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* ec number:
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** 6396
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** 71.28051   
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** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ASPDECARBOX-RXN]]
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** 1 [[NADPH]][c] '''+''' 1 [[3-OXO-EICOSAPENTAENOYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-HYDROXY-DOCOSAPENTAENOYL-ACP]][c] '''+''' 1 [[NADP]][c]
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** Source: [[orthology-synechocystis]]
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* With common name(s):
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* Reaction: [[GLUTDECARBOX-RXN]]
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** 1 NADPH[c] '''+''' 1 a 3-oxo-docosapentaenoyl [acp][c] '''+''' 1 H+[c] '''=>''' 1 a (3R)-3-hydroxy-docosapentaenoyl-[acp][c] '''+''' 1 NADP+[c]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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** Source: [[orthology-athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-synechocystis]]
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* [[Tiso_gene_9885]]
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== Pathways associated ==
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** EXPERIMENTAL_ANNOTATION
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* [[PWY-4321]]
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***EC-NUMBER
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* [[PWY-5155]]
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* [[Tiso_gene_13394]]
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* [[GLUDEG-I-PWY]]
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** IN-SILICO_ANNOTATION
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* [[PWY0-1305]]
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***EC-NUMBER
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* [[Tiso_gene_13083]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_500]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10876]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=8917}}
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{{#set: common name=polyketide_synthase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
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{{#set: left end position=6396}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: centisome position=71.28051    }}
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{{#set: ec number=EC-2.3.1.85}}
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{{#set: reaction associated=ASPDECARBOX-RXN|GLUTDECARBOX-RXN}}
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{{#set: ec number=EC-1.1.1.100}}
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{{#set: pathway associated=PWY-4321|PWY-5155|GLUDEG-I-PWY|PWY0-1305}}
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{{#set: gene associated=Tiso_gene_9885|Tiso_gene_13394|Tiso_gene_13083|Tiso_gene_136|Tiso_gene_135|Tiso_gene_500|Tiso_gene_10876}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 20:39, 21 March 2018

Gene Tiso_gene_9927

  • right end position:
    • 8917
  • transcription direction:
    • POSITIVE
  • left end position:
    • 6396
  • centisome position:
    • 71.28051
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_9927&oldid=43069"