Difference between revisions of "Tiso gene 9942"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9556 RXN-9556] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-cis-vaccenoyl-[acyl-car...")
 
(Created page with "Category:Gene == Gene Tiso_gene_9942 == * right end position: ** 8785 * transcription direction: ** NEGATIVE * left end position: ** 5409 * centisome position: ** 60.38178...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9556 RXN-9556] ==
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== Gene Tiso_gene_9942 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 8785
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* common name:
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* transcription direction:
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** 3-oxo-cis-vaccenoyl-[acyl-carrier protein] reductase
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** NEGATIVE
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** 3-oxoacyl-(acyl-carrier-protein)
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* left end position:
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* ec number:
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** 5409
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** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
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* centisome position:
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** 60.381783   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[2.3.1.118-RXN]]
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** 1 [[NADPH]][c] '''+''' 1 [[3-oxo-cis-vaccenoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[R-3-hydroxy-cis-vaccenoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 NADPH[c] '''+''' 1 a 3-oxo-cis-vacc-11-enoyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 (R)-3-hydroxy-cis-vacc-11-enoyl-[acp][c] '''+''' 1 NADP+[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: automated-name-match
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== Genes associated with this reaction  ==
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* Reaction: [[ARYLAMINE-N-ACETYLTRANSFERASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[annotation-in-silico_annotation]]
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* [[Tiso_gene_9885]]
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*** Assignment: automated-name-match
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** EXPERIMENTAL_ANNOTATION
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** Source: [[annotation-experimental_annotation]]
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***EC-NUMBER
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*** Assignment: automated-name-match
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* [[Tiso_gene_13083]]
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* Reaction: [[RXN-13870]]
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** IN-SILICO_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** Assignment: automated-name-match
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** EXPERIMENTAL_ANNOTATION
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** Source: [[annotation-experimental_annotation]]
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***EC-NUMBER
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*** Assignment: automated-name-match
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** [[pantograph]]-[[esiliculosus]]
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* Reaction: [[RXN-13871]]
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== Pathways  ==
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-5973]], cis-vaccenate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5973 PWY-5973]
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*** Assignment: automated-name-match
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** '''4''' reactions found over '''5''' reactions in the full pathway
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** Source: [[annotation-experimental_annotation]]
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== Reconstruction information  ==
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*** Assignment: automated-name-match
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* [[orthology]]:
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== Pathways associated ==
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=8785}}
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{{#set: common name=3-oxo-cis-vaccenoyl-[acyl-carrier protein] reductase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
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{{#set: left end position=5409}}
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{{#set: ec number=EC-1.1.1.100}}
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{{#set: centisome position=60.381783    }}
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{{#set: gene associated=Tiso_gene_9885|Tiso_gene_13083}}
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{{#set: reaction associated=2.3.1.118-RXN|ARYLAMINE-N-ACETYLTRANSFERASE-RXN|RXN-13870|RXN-13871}}
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{{#set: in pathway=PWY-5973}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 21:19, 21 March 2018

Gene Tiso_gene_9942

  • right end position:
    • 8785
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 5409
  • centisome position:
    • 60.381783
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_9942&oldid=47851"