Difference between revisions of "TransportSeed CU+"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_9642 == * left end position: ** 104 * transcription direction: ** POSITIVE * right end position: ** 1464 * centisome position: ** 1.1357431...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P23-PWY P23-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3052 TAX-3052...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Pathway]]
−
== Gene Tiso_gene_9642 ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P23-PWY P23-PWY] ==
−
* left end position:
+
* taxonomic range:
−
** 104
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3052 TAX-3052]
−
* transcription direction:
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
−
** POSITIVE
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
−
* right end position:
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-68336 TAX-68336]
−
** 1464
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200783 TAX-200783]
−
* centisome position:
+
* common name:
−
** 1.1357431   
+
** reductive TCA cycle I
 
* Synonym(s):
 
* Synonym(s):
 +
** reductive tricarboxylic acid cycle
 +
** reductive tricarboxylic acid pathway
 +
** reductive citric acid cycle
 +
** reverse citric acid cycle
 +
** carbon fixation
 +
** CO2 fixation
 +
** reductive carboxylic acid cycle
  
−
== Reactions associated ==
+
== Reaction(s) found ==
−
* [[RXN0-302]]
+
'''7''' reactions found over '''12''' reactions in the full pathway
−
** in-silico_annotation
+
* [[ACONITATEDEHYDR-RXN]]
−
***ec-number
+
** 1 associated gene(s):
−
** experimental_annotation
+
*** [[Tiso_gene_13007]]
−
***ec-number
+
** 3 reconstruction source(s) associated:
−
** [[pantograph]]-[[synechocystis]]
+
*** [[annotation-experimental_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[creinhardtii]]
+
*** [[orthology-synechocystis]]
−
== Pathways associated ==
+
* [[ACONITATEHYDR-RXN]]
−
* [[NONMEVIPP-PWY]]
+
** 1 associated gene(s):
−
* [[PWY-7560]]
+
*** [[Tiso_gene_13007]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[FUMHYDR-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_6720]]
 +
*** [[Tiso_gene_3691]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[ISOCITDEH-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_18262]]
 +
*** [[Tiso_gene_10809]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[MALATE-DEH-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_1990]]
 +
*** [[Tiso_gene_2323]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[PEPSYNTH-RXN]]
 +
** 0 associated gene:
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[SUCCCOASYN-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_15846]]
 +
*** [[Tiso_gene_11866]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=2-OXOGLUTARATE-SYNTHASE-RXN 2-OXOGLUTARATE-SYNTHASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=ATP-CITRATE-PRO-S--LYASE-RXN ATP-CITRATE-PRO-S--LYASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOX-RXN PEPCARBOX-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PYRUFLAVREDUCT-RXN PYRUFLAVREDUCT-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=104}}
+
{{#set: taxonomic range=TAX-3052}}
−
{{#set: transcription direction=POSITIVE}}
+
{{#set: taxonomic range=TAX-1224}}
−
{{#set: right end position=1464}}
+
{{#set: taxonomic range=TAX-2157}}
−
{{#set: centisome position=1.1357431    }}
+
{{#set: taxonomic range=TAX-68336}}
−
{{#set: reaction associated=RXN0-302}}
+
{{#set: taxonomic range=TAX-200783}}
−
{{#set: pathway associated=NONMEVIPP-PWY|PWY-7560}}
+
{{#set: common name=reductive TCA cycle I}}
 +
{{#set: common name=reductive tricarboxylic acid cycle|reductive tricarboxylic acid pathway|reductive citric acid cycle|reverse citric acid cycle|carbon fixation|CO2 fixation|reductive carboxylic acid cycle}}
 +
{{#set: reaction found=7}}
 +
{{#set: total reaction=12}}
 +
{{#set: completion rate=58.0}}

Revision as of 19:16, 18 March 2018

Pathway P23-PWY

  • taxonomic range:
  • common name:
    • reductive TCA cycle I
  • Synonym(s):
    • reductive tricarboxylic acid cycle
    • reductive tricarboxylic acid pathway
    • reductive citric acid cycle
    • reverse citric acid cycle
    • carbon fixation
    • CO2 fixation
    • reductive carboxylic acid cycle

Reaction(s) found

7 reactions found over 12 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=TransportSeed_CU%2B&oldid=23079"