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| − | [[Category:Pathway]] | + | [[Category:Reaction]] |
| − | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P23-PWY P23-PWY] == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TransportSeed_CU+ TransportSeed_CU+] == |
| − | * taxonomic range: | + | * direction: |
| − | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3052 TAX-3052] | + | ** LEFT-TO-RIGHT |
| − | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
| + | |
| − | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
| + | |
| − | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-68336 TAX-68336]
| + | |
| − | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200783 TAX-200783]
| + | |
| − | * common name:
| + | |
| − | ** reductive TCA cycle I
| + | |
| | * Synonym(s): | | * Synonym(s): |
| − | ** reductive tricarboxylic acid cycle
| |
| − | ** reductive tricarboxylic acid pathway
| |
| − | ** reductive citric acid cycle
| |
| − | ** reverse citric acid cycle
| |
| − | ** carbon fixation
| |
| − | ** CO2 fixation
| |
| − | ** reductive carboxylic acid cycle
| |
| | | | |
| − | == Reaction(s) found == | + | == Reaction Formula == |
| − | '''7''' reactions found over '''12''' reactions in the full pathway
| + | * With identifiers: |
| − | * [[ACONITATEDEHYDR-RXN]] | + | ** 1.0 [[CU+]][e] '''=>''' 1.0 [[CU+]][c] |
| − | ** 1 associated gene(s): | + | * With common name(s): |
| − | *** [[Tiso_gene_13007]]
| + | ** 1.0 Cu+[e] '''=>''' 1.0 Cu+[c] |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | == Genes associated with this reaction == |
| − | *** [[annotation-in-silico_annotation]]
| + | == Pathways == |
| − | *** [[orthology-synechocystis]]
| + | == Reconstruction information == |
| − | * [[ACONITATEHYDR-RXN]]
| + | * Category: [[manual]] |
| − | ** 1 associated gene(s):
| + | ** Source: [[manual-import_from_medium]] |
| − | *** [[Tiso_gene_13007]]
| + | *** Comment: [[added to manage seeds from extracellular to cytosol compartment]] |
| − | ** 2 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[annotation-experimental_annotation]] | + | |
| − | * [[FUMHYDR-RXN]]
| + | |
| − | ** 2 associated gene(s):
| + | |
| − | *** [[Tiso_gene_6720]] | + | |
| − | *** [[Tiso_gene_3691]]
| + | |
| − | ** 6 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | * [[ISOCITDEH-RXN]]
| + | |
| − | ** 2 associated gene(s):
| + | |
| − | *** [[Tiso_gene_18262]]
| + | |
| − | *** [[Tiso_gene_10809]]
| + | |
| − | ** 4 reconstruction source(s) associated: | + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[annotation-experimental_annotation]] | + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | * [[MALATE-DEH-RXN]]
| + | |
| − | ** 2 associated gene(s):
| + | |
| − | *** [[Tiso_gene_1990]]
| + | |
| − | *** [[Tiso_gene_2323]]
| + | |
| − | ** 7 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-creinhardtii]] | + | |
| − | * [[PEPSYNTH-RXN]]
| + | |
| − | ** 0 associated gene:
| + | |
| − | ** 2 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | * [[SUCCCOASYN-RXN]]
| + | |
| − | ** 2 associated gene(s):
| + | |
| − | *** [[Tiso_gene_15846]]
| + | |
| − | *** [[Tiso_gene_11866]]
| + | |
| − | ** 7 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | == Reaction(s) not found ==
| + | |
| − | * [http://metacyc.org/META/NEW-IMAGE?object=2-OXOGLUTARATE-SYNTHASE-RXN 2-OXOGLUTARATE-SYNTHASE-RXN]
| + | |
| − | * [http://metacyc.org/META/NEW-IMAGE?object=ATP-CITRATE-PRO-S--LYASE-RXN ATP-CITRATE-PRO-S--LYASE-RXN]
| + | |
| − | * [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOX-RXN PEPCARBOX-RXN]
| + | |
| − | * [http://metacyc.org/META/NEW-IMAGE?object=PYRUFLAVREDUCT-RXN PYRUFLAVREDUCT-RXN]
| + | |
| − | * [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
| + | |
| | == External links == | | == External links == |
| − | {{#set: taxonomic range=TAX-3052}} | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: taxonomic range=TAX-1224}}
| + | {{#set: in pathway=}} |
| − | {{#set: taxonomic range=TAX-2157}} | + | {{#set: reconstruction category=manual}} |
| − | {{#set: taxonomic range=TAX-68336}} | + | {{#set: reconstruction source=manual-import_from_medium}} |
| − | {{#set: taxonomic range=TAX-200783}} | + | {{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}} |
| − | {{#set: common name=reductive TCA cycle I}}
| + | |
| − | {{#set: common name=reductive tricarboxylic acid cycle|reductive tricarboxylic acid pathway|reductive citric acid cycle|reverse citric acid cycle|carbon fixation|CO2 fixation|reductive carboxylic acid cycle}}
| + | |
| − | {{#set: reaction found=7}}
| + | |
| − | {{#set: total reaction=12}}
| + | |
| − | {{#set: completion rate=58.0}} | + | |
