Manual

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 Common nameEc numberReconstruction categoryReconstruction toolReconstruction sourceReconstruction commentGene associatedIn pathway
3-PHOSPHOGLYCERATE-PHOSPHATASE-RXNEC-3.1.3.38ManualManual-reactions to addAdded to produce glycerate
ALANINE-DEHYDROGENASE-RXNEC-1.4.1.1ManualManual-ala dehyAdded for fbaCHC T00008930001PWY1-2
ARGININE-2-MONOOXYGENASE-RXNEC-1.13.12.1ManualManual-reactions to addIs an essential reaction of e.siliculosusARGDEG-V-PWY
BIOMASS-RXNManualReaction of biomass production
Biomass rxnManualManual-biomass reactionForfba
C-22 sterol desaturaseManualManual-new reactions curationAb initio inferenceCYP
FMO
Exchange BIOMASSManualManual-biomass reactionExchange biomass to boundary
ExchangeDeadEnd ACETManualReaction added to avoid biomass-compositions accumulation
ExchangeDeadEnd ADPManualReaction added to avoid biomass-compositions accumulation
ExchangeDeadEnd CARBON-DIOXIDEManualReaction added to avoid biomass-compositions accumulation
ExchangeDeadEnd CO-AManualReaction added to avoid biomass-compositions accumulation
ExchangeDeadEnd FUMManualReaction added to avoid biomass-compositions accumulation
ExchangeDeadEnd NADManualReaction added to avoid biomass-compositions accumulation
ExchangeDeadEnd SUCManualReaction added to avoid biomass-compositions accumulation
ExchangeSeed ACPManualAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed ADENOSYLCOBALAMINManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed ADPManualAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed AMMONIAManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed AMMONIUMManualAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed AMPManualAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed ATPManualAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed BIOTINManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed CA+2ManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed CARBON-DIOXIDEManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed CDPManualAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed CL-ManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed CO+2ManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed COB-I-ALAMINManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed CPD-3ManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed CPD-315ManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed CU+ManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed CU+2ManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed EDTAManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed FE+2ManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed FE+3ManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed GDPManualAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed GTPManualAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed K+ManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed LightManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed MG+2ManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed MN+2ManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed NA+ManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed NADManualAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed NAD+ManualAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed NADHManualAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed NITRATEManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed OXYGEN-MOLECULEManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed PPIManualAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed PROTONManualManual-import from mediumAdded to manage seeds from boundary to extracellular compartment
ExchangeSeed PiManualAdded to manage seeds from boundary to extracellular compartment
... further results