View source for RNASE-R-DEGRADATION-SUBSTRATE-RNA

[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5468 RXN-5468] ==
* direction:
** LEFT-TO-RIGHT
* ec number:
** [http://enzyme.expasy.org/EC/2.4.1.260 EC-2.4.1.260]
* Synonym(s):

== Reaction Formula ==
* With identifiers:
** 1 [[CPD-171]][c] '''+''' 1 [[CPD-5166]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[DOLICHOLP]][c] '''+''' 1 [[CPD-5167]][c]
* With common name(s):
** 1 a dolichyl &beta;-D-mannosyl phosphate[c] '''+''' 1 &alpha;-D-Man-(1&rarr;2)-&alpha;-D-Man-(1&rarr;2)-&alpha;-D-Man-(1&rarr;3)-[&alpha;-D-Man-(1&rarr;2)-&alpha;-D-Man-(1&rarr;3)-&alpha;-D-Man-(1&rarr;6)]-&beta;-D-Man-(1&rarr;4)-&beta;-D-GlcNAc-(1&rarr;4)-&alpha;-D-GlcNAc-diphosphodolichol[c] '''=>''' 1 H+[c] '''+''' 1 a dolichyl phosphate[c] '''+''' 1 &alpha;-D-Man-a-(1&rarr;2)-&alpha;-D-Man-(1&rarr;2)-&alpha;-D-Man-(1&rarr;3)-[&alpha;-D-Man-(1&rarr;2)-&alpha;-D-Man-(1&rarr;3)-[&alpha;-D-Man-(1&rarr;6)]-&alpha;-D-Man-(1&rarr;6)]-&beta;-D-Man-(1&rarr;4)-&beta;-D-GlcNAc-(1&rarr;4)-&alpha;-D-GlcNAc-diphosphodolichol[c]

== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
* [[CHC_T00009193001_1]]
** [[pantograph]]-[[galdieria.sulphuraria]]
== Pathways  ==
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
** '''12''' reactions found over '''19''' reactions in the full pathway
== Reconstruction information  ==
* [[orthology]]:
** [[pantograph]]:
*** [[galdieria.sulphuraria]]
== External links  ==
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29538 29538]
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R06260 R06260]
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: ec number=EC-2.4.1.260}}
{{#set: gene associated=CHC_T00009193001_1}}
{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=galdieria.sulphuraria}}