Difference between revisions of "PWY-6148"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8665 RXN-8665] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6148 PWY-6148] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-578822 TAX-...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8665 RXN-8665] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6148 PWY-6148] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-578822 TAX-578822]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-224756]
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** [http://enzyme.expasy.org/EC/1.13.11.11 EC-1.13.11.11]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183925 TAX-183925]
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** [http://enzyme.expasy.org/EC/1.13.11.52 EC-1.13.11.52]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183939 TAX-183939]
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* common name:
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** tetrahydromethanopterin biosynthesis
 
* Synonym(s):
 
* Synonym(s):
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** H4MPT biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''14''' reactions in the full pathway
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** 1 [[TRP]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[N-FORMYLKYNURENINE]][c]
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* [[H2NEOPTERINALDOL-RXN]]
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* With common name(s):
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** 0 associated gene:
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** 1 L-tryptophan[c] '''+''' 1 oxygen[c] '''=>''' 1 N-formylkynurenine[c]
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** 1 reconstruction source(s) associated:
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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== Genes associated with this reaction  ==
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* [[RXN-15733]]
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Genes have been associated with this reaction based on different elements listed below.
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** 2 associated gene(s):
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* [[CHC_T00007484001_1]]
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*** [[CHC_T00007059001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[CHC_T00003007001_1]]
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== Pathways  ==
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** 1 reconstruction source(s) associated:
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* [[PWY-7765]], 3-hydroxy-4-methyl-anthranilate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7765 PWY-7765]
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*** [[orthology-ectocarpus_siliculosus]]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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== Reaction(s) not found ==
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* [[PWY-5651]], L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5651 PWY-5651]
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* [http://metacyc.org/META/NEW-IMAGE?object=CHORPYRLY-RXN CHORPYRLY-RXN]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10010 RXN-10010]
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* [[TRPCAT-PWY]], L-tryptophan degradation I (via anthranilate): [http://metacyc.org/META/NEW-IMAGE?object=TRPCAT-PWY TRPCAT-PWY]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10011 RXN-10011]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10012 RXN-10012]
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* [[PWY-6309]], L-tryptophan degradation XI (mammalian, via kynurenine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6309 PWY-6309]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10013 RXN-10013]
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** '''7''' reactions found over '''17''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10014 RXN-10014]
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* [[PWY-7717]], 3-hydroxy-4-methyl-anthranilate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7717 PWY-7717]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15555 RXN-15555]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15732 RXN-15732]
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== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15734 RXN-15734]
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* [[orthology]]:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15741 RXN-15741]
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** [[pantograph]]:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15742 RXN-15742]
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*** [[galdieria.sulphuraria]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8124 RXN-8124]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-578822}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24536 24536]
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{{#set: taxonomic range=TAX-224756}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-183925}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00678 R00678]
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{{#set: taxonomic range=TAX-183939}}
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* UNIPROT:
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{{#set: common name=tetrahydromethanopterin biosynthesis}}
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** [http://www.uniprot.org/uniprot/P21643 P21643]
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{{#set: common name=H4MPT biosynthesis}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=2}}
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{{#set: ec number=EC-1.13.11.11}}
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{{#set: total reaction=14}}
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{{#set: ec number=EC-1.13.11.52}}
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{{#set: completion rate=14.0}}
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{{#set: gene associated=CHC_T00007484001_1}}
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{{#set: in pathway=PWY-7765|PWY-5651|TRPCAT-PWY|PWY-6309|PWY-7717}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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Revision as of 15:50, 23 May 2018

Pathway PWY-6148

Reaction(s) found

2 reactions found over 14 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-6148&oldid=12262"