Difference between revisions of "RXN-15378"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.46-RXN 2.4.1.46-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15378 RXN-15378] == * direction: ** LEFT-TO-RIGHT * common name: ** succinate dehydrogenase (Co...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.46-RXN 2.4.1.46-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15378 RXN-15378] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** succinate dehydrogenase (Complex II) flavoprotein subunit precursor
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.4.1.46 EC-2.4.1.46]
+
** [http://enzyme.expasy.org/EC/1.3.5.1 EC-1.3.5.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[DIACYLGLYCEROL]][c] '''+''' 1 [[CPD-14553]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c] '''+''' 1 [[D-Galactosyl-12-diacyl-glycerols]][c]
+
** 1 [[SUC]][c] '''+''' 1 [[CPD-9612]][c] '''=>''' 1 [[CPD-15301]][c] '''+''' 1 [[FUM]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a 1,2-diacyl-sn-glycerol[c] '''+''' 1 UDP-α-D-galactose[c] '''=>''' 1 H+[c] '''+''' 1 UDP[c] '''+''' 1 a 1,2-diacyl-3-O-(β-D-galactopyranosyl)-sn-glycerol[c]
+
** 1 succinate[c] '''+''' 1 caldariellaquinone[c] '''=>''' 1 caldariellaquinol[c] '''+''' 1 fumarate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00008381001_1]]
+
* Gene: [[CHC_T00008943001]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[annotation-original_genome]]
−
** [[pantograph]]-[[a.taliana]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[CHC_T00008619001_1]]
+
* Gene: [[CHC_T00006990001_1]]
−
** [[pantograph]]-[[a.taliana]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
* [[CHC_T00008753001_1]]
+
* Gene: [[CHC_T00007286001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
* [[CHC_T00009002001_1]]
+
* Gene: [[CHC_T00008943001_1]]
−
** [[pantograph]]-[[a.taliana]]
+
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00001817001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00007584001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-401]], galactolipid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-401 PWY-401]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
*** [[a.taliana]]
+
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14945 14945]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02691 R02691]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/O81770 O81770]
 
−
** [http://www.uniprot.org/uniprot/P93115 P93115]
 
−
** [http://www.uniprot.org/uniprot/O82730 O82730]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.4.1.46}}
+
{{#set: common name=succinate dehydrogenase (Complex II) flavoprotein subunit precursor}}
−
{{#set: gene associated=CHC_T00008381001_1|CHC_T00008619001_1|CHC_T00008753001_1|CHC_T00009002001_1}}
+
{{#set: ec number=EC-1.3.5.1}}
−
{{#set: in pathway=PWY-401}}
+
{{#set: gene associated=CHC_T00008943001|CHC_T00006990001_1|CHC_T00007286001_1|CHC_T00008943001_1|CHC_T00001817001_1|CHC_T00007584001_1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
+
{{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:58, 23 May 2018

Reaction RXN-15378

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • succinate dehydrogenase (Complex II) flavoprotein subunit precursor
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 succinate[c] + 1 caldariellaquinone[c] => 1 caldariellaquinol[c] + 1 fumarate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-15378&oldid=12730"