Difference between revisions of "PWY-5410"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14160 RXN-14160] == * direction: ** LEFT-TO-RIGHT * common name: ** glycerophosphorylethanolami...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5410 PWY-5410] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-31...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14160 RXN-14160] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5410 PWY-5410] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
 
* common name:
 
* common name:
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** glycerophosphorylethanolamine phosphodiesterase
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** traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
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** Glycerophosphoryl diester phosphodiesterase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.4.46 EC-3.1.4.46]
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** [http://enzyme.expasy.org/EC/3.1.4.2 EC-3.1.4.2]
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* Synonym(s):
 
* Synonym(s):
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** 13-lipoxygenase and 13-hydroperoxide lyase pathway
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** 13-LOX and 13-HPL pathway
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''9''' reactions in the full pathway
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** 1 [[WATER]][c] '''+''' 1 [[L-1-GLYCEROPHOSPHORYLETHANOL-AMINE]][c] '''=>''' 1 [[ETHANOL-AMINE]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[PROTON]][c]
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* [[HYDROHEX-RXN]]
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* With common name(s):
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** 0 associated gene:
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** 1 H2O[c] '''+''' 1 sn-glycero-3-phosphoethanolamine[c] '''=>''' 1 ethanolamine[c] '''+''' 1 sn-glycerol 3-phosphate[c] '''+''' 1 H+[c]
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** 1 reconstruction source(s) associated:
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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== Genes associated with this reaction  ==
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* [[LIPOXYGENASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** 0 associated gene:
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* [[CHC_T00009254001]]
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** 1 reconstruction source(s) associated:
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** ORIGINAL_GENOME
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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***AUTOMATED-NAME-MATCH
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* [[RXN-1321]]
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== Pathways  ==
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** 2 associated gene(s):
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* [[PWY-7409]], phospholipid remodeling (phosphatidylethanolamine, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7409 PWY-7409]
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*** [[CHC_T00008739001]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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*** [[CHC_T00008739001_1]]
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== Reconstruction information  ==
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** 3 reconstruction source(s) associated:
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* [[annotation]]:
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*** [[annotation-original_genome]]
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** [[pathwaytools]]:
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*** [[orthology-arabidopsis_thaliana]]
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*** [[original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11852 RXN-11852]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12299 RXN-12299]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1345 RXN-1345]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1346 RXN-1346]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1347 RXN-1347]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1349 RXN-1349]
 
== External links  ==
 
== External links  ==
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* RHEA:
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* ARACYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29320 29320]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-5410 PWY-5410]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-3193}}
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{{#set: common name=glycerophosphorylethanolamine phosphodiesterase}}
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{{#set: common name=traumatin and (Z)-3-hexen-1-yl acetate biosynthesis}}
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{{#set: common name=Glycerophosphoryl diester phosphodiesterase}}
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{{#set: common name=13-lipoxygenase and 13-hydroperoxide lyase pathway|13-LOX and 13-HPL pathway}}
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{{#set: ec number=EC-3.1.4.46}}
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{{#set: reaction found=3}}
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{{#set: ec number=EC-3.1.4.2}}
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{{#set: total reaction=9}}
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{{#set: gene associated=CHC_T00009254001}}
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{{#set: completion rate=33.0}}
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{{#set: in pathway=PWY-7409}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Revision as of 15:01, 23 May 2018

Pathway PWY-5410

  • taxonomic range:
  • common name:
    • traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
  • Synonym(s):
    • 13-lipoxygenase and 13-hydroperoxide lyase pathway
    • 13-LOX and 13-HPL pathway

Reaction(s) found

3 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-5410&oldid=12925"