Difference between revisions of "PWY-5994"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-8678 CPD-8678] == * smiles: ** CCC=CCC=CC=CC(CCCCCCCC([O-])=O)OO * inchi key: ** InChIKey=R...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-3...")
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[[Category:Metabolite]]
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[[Category:Pathway]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-8678 CPD-8678] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994] ==
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* smiles:
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* taxonomic range:
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** CCC=CCC=CC=CC(CCCCCCCC([O-])=O)OO
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-33154]
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* inchi key:
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** InChIKey=RWKJTIHNYSIIHW-MEBVTJQTSA-M
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* common name:
 
* common name:
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** 9(S)-HPOTE
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** palmitate biosynthesis I (animals and fungi)
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* molecular weight:
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−
** 309.425   
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* Synonym(s):
 
* Synonym(s):
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** 9(S)-hydroperoxy-10(E),12(Z),15(Z)-octadecatrienoic acid
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** palmitic acid biosynthesis
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** 9(S)-hydroperoxy-10(E),12(Z),15(Z)-octadecatrienoate
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** de novo lipogenesis
  
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== Reaction(s) known to consume the compound ==
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== Reaction(s) found ==
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== Reaction(s) known to produce the compound ==
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'''22''' reactions found over '''31''' reactions in the full pathway
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* [[RXN-8497]]
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* [[3.1.2.21-RXN]]
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== Reaction(s) of unknown directionality ==
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** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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* [[4.2.1.58-RXN]]
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** 1 associated gene(s):
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*** [[CHC_T00009190001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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* [[4.2.1.59-RXN]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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* [[4.2.1.61-RXN]]
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** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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* [[RXN-9514]]
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** 4 associated gene(s):
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*** [[CHC_T00008517001_1]]
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*** [[CHC_T00008496001]]
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*** [[CHC_T00008477001]]
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*** [[CHC_T00008557001]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[RXN-9518]]
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** 4 associated gene(s):
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*** [[CHC_T00008557001]]
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*** [[CHC_T00008517001_1]]
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*** [[CHC_T00008496001]]
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*** [[CHC_T00008477001]]
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** 3 reconstruction source(s) associated:
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
*** [[orthology-galdieria.sulphuraria]]
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* [[RXN-9520]]
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** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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* [[RXN-9524]]
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** 4 associated gene(s):
 +
*** [[CHC_T00008496001]]
 +
*** [[CHC_T00008517001_1]]
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*** [[CHC_T00008557001]]
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*** [[CHC_T00008477001]]
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** 3 reconstruction source(s) associated:
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
*** [[orthology-galdieria.sulphuraria]]
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* [[RXN-9528]]
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** 4 associated gene(s):
 +
*** [[CHC_T00008477001]]
 +
*** [[CHC_T00008517001_1]]
 +
*** [[CHC_T00008496001]]
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*** [[CHC_T00008557001]]
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** 3 reconstruction source(s) associated:
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
*** [[orthology-galdieria.sulphuraria]]
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* [[RXN-9532]]
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** 4 associated gene(s):
 +
*** [[CHC_T00008557001]]
 +
*** [[CHC_T00008496001]]
 +
*** [[CHC_T00008517001_1]]
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*** [[CHC_T00008477001]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
*** [[orthology-galdieria.sulphuraria]]
 +
* [[RXN-9533]]
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** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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* [[RXN-9536]]
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** 4 associated gene(s):
 +
*** [[CHC_T00008557001]]
 +
*** [[CHC_T00008517001_1]]
 +
*** [[CHC_T00008496001]]
 +
*** [[CHC_T00008477001]]
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** 3 reconstruction source(s) associated:
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
*** [[orthology-galdieria.sulphuraria]]
 +
* [[RXN-9537]]
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** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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* [[RXN-9540]]
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** 4 associated gene(s):
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*** [[CHC_T00008557001]]
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*** [[CHC_T00008496001]]
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*** [[CHC_T00008517001_1]]
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*** [[CHC_T00008477001]]
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** 3 reconstruction source(s) associated:
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
*** [[orthology-galdieria.sulphuraria]]
 +
* [[RXN-9549]]
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** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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* [[RXN-9648]]
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** 2 associated gene(s):
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*** [[CHC_T00009465001_1]]
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*** [[CHC_T00009465001]]
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** 2 reconstruction source(s) associated:
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
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* [[RXN-9650]]
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** 2 associated gene(s):
 +
*** [[CHC_T00009465001]]
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*** [[CHC_T00009465001_1]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[RXN-9651]]
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** 2 associated gene(s):
 +
*** [[CHC_T00009465001_1]]
 +
*** [[CHC_T00009465001]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[RXN-9652]]
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** 2 associated gene(s):
 +
*** [[CHC_T00009465001]]
 +
*** [[CHC_T00009465001_1]]
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** 2 reconstruction source(s) associated:
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[RXN-9653]]
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** 2 associated gene(s):
 +
*** [[CHC_T00009465001_1]]
 +
*** [[CHC_T00009465001]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
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* [[RXN-9654]]
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** 2 associated gene(s):
 +
*** [[CHC_T00009465001_1]]
 +
*** [[CHC_T00009465001]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[RXN-9655]]
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** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PALMITOYL-COA-HYDROLASE-RXN PALMITOYL-COA-HYDROLASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9515 RXN-9515]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9521 RXN-9521]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9526 RXN-9526]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9530 RXN-9530]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9534 RXN-9534]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9538 RXN-9538]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9542 RXN-9542]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-9780 RXN3O-9780]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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{{#set: taxonomic range=TAX-33154}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=49852426 49852426]
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{{#set: common name=palmitate biosynthesis I (animals and fungi)}}
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* CHEBI:
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{{#set: common name=palmitic acid biosynthesis|de novo lipogenesis}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=60962 60962]
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{{#set: reaction found=22}}
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* LIGAND-CPD:
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{{#set: total reaction=31}}
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** [http://www.genome.jp/dbget-bin/www_bget?C16321 C16321]
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{{#set: completion rate=71.0}}
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{{#set: smiles=CCC=CCC=CC=CC(CCCCCCCC([O-])=O)OO}}
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−
{{#set: inchi key=InChIKey=RWKJTIHNYSIIHW-MEBVTJQTSA-M}}
+
−
{{#set: common name=9(S)-HPOTE}}
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−
{{#set: molecular weight=309.425    }}
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−
{{#set: common name=9(S)-hydroperoxy-10(E),12(Z),15(Z)-octadecatrienoic acid|9(S)-hydroperoxy-10(E),12(Z),15(Z)-octadecatrienoate}}
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−
{{#set: produced by=RXN-8497}}
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Revision as of 16:02, 23 May 2018

Pathway PWY-5994

  • taxonomic range:
  • common name:
    • palmitate biosynthesis I (animals and fungi)
  • Synonym(s):
    • palmitic acid biosynthesis
    • de novo lipogenesis

Reaction(s) found

22 reactions found over 31 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-5994&oldid=12979"