Difference between revisions of "RXN-12279"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BIOTIN-CARBOXYL-RXN BIOTIN-CARBOXYL-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://e...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12279 RXN-12279] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BIOTIN-CARBOXYL-RXN BIOTIN-CARBOXYL-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12279 RXN-12279] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.3.4.14 EC-6.3.4.14]
+
** [http://enzyme.expasy.org/EC/3.2.1.2 EC-3.2.1.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[BCCP-dimers]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''=>''' 1 [[Carboxybiotin-BCCP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
+
** n [[WATER]][c] '''+''' 1 [[CPD-13198]][c] '''=>''' 1 [[Branched-Unphos-Amylopectin-Tails]][c] '''+''' 1 [[MALTOSE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a biotinylated [BCCP dimer][c] '''+''' 1 ATP[c] '''+''' 1 hydrogencarbonate[c] '''=>''' 1 a carboxylated-biotinylated [BCCP dimer][c] '''+''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
+
** n H2O[c] '''+''' 1 an exposed unphosphorylated, unbranched malto-oligosaccharide tail on amylopectin[c] '''=>''' 1 an exposed unphosphorylated, (α-1,6)-branched malto-oligosaccharide tail on amylopectin[c] '''+''' 1 maltose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00009359001_1]]
+
* Gene: [[CHC_T00008493001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
* [[CHC_T00007145001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY0-1264]], biotin-carboxyl carrier protein assembly: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1264 PWY0-1264]
+
* [[PWY-6724]], starch degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6724 PWY-6724]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''6''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04385 R04385]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q06862 Q06862]
 
−
** [http://www.uniprot.org/uniprot/O67483 O67483]
 
−
** [http://www.uniprot.org/uniprot/Q9CHF3 Q9CHF3]
 
−
** [http://www.uniprot.org/uniprot/Q58626 Q58626]
 
−
** [http://www.uniprot.org/uniprot/P43873 P43873]
 
−
** [http://www.uniprot.org/uniprot/Q9PN09 Q9PN09]
 
−
** [http://www.uniprot.org/uniprot/Q9JW07 Q9JW07]
 
−
** [http://www.uniprot.org/uniprot/P24182 P24182]
 
−
** [http://www.uniprot.org/uniprot/O04983 O04983]
 
−
** [http://www.uniprot.org/uniprot/O81273 O81273]
 
−
** [http://www.uniprot.org/uniprot/Q42777 Q42777]
 
−
** [http://www.uniprot.org/uniprot/Q39825 Q39825]
 
−
** [http://www.uniprot.org/uniprot/O23960 O23960]
 
−
** [http://www.uniprot.org/uniprot/O52602 O52602]
 
−
** [http://www.uniprot.org/uniprot/Q9R9I4 Q9R9I4]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-6.3.4.14}}
+
{{#set: ec number=EC-3.2.1.2}}
−
{{#set: gene associated=CHC_T00009359001_1|CHC_T00007145001_1}}
+
{{#set: gene associated=CHC_T00008493001_1}}
−
{{#set: in pathway=PWY0-1264}}
+
{{#set: in pathway=PWY-6724}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
 

Latest revision as of 16:04, 23 May 2018

Reaction RXN-12279

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • n H2O[c] + 1 an exposed unphosphorylated, unbranched malto-oligosaccharide tail on amylopectin[c] => 1 an exposed unphosphorylated, (α-1,6)-branched malto-oligosaccharide tail on amylopectin[c] + 1 maltose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6724, starch degradation II: PWY-6724
    • 6 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-12279&oldid=13087"