Difference between revisions of "PWY-3841"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.4-RXN 3.1.26.4-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.4-RXN 3.1.26.4-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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* ec number:
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* common name:
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** [http://enzyme.expasy.org/EC/3.1.26.4 EC-3.1.26.4]
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** folate transformations II
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''8''' reactions found over '''11''' reactions in the full pathway
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** n [[WATER]][c] '''+''' 1 [[RNA-DNA-hybrids]][c] '''=>''' n [[Nucleoside-Monophosphates]][c] '''+''' 1 [[DNA-Holder]][c]
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* [[1.5.1.20-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** n H2O[c] '''+''' 1 a RNA-DNA hybrid[c] '''=>''' n a nucleoside 5'-monophosphate[c] '''+''' 1 DNA[c]
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*** [[CHC_T00008486001_1]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-ectocarpus_siliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-galdieria.sulphuraria]]
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* [[CHC_T00007240001_1]]
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* [[DIHYDROFOLATEREDUCT-RXN]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** 2 associated gene(s):
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* [[CHC_T00003815001_1]]
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*** [[CHC_T00010030001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[CHC_T00008680001_1]]
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== Pathways  ==
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** 2 reconstruction source(s) associated:
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== Reconstruction information  ==
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*** [[orthology-ectocarpus_siliculosus]]
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* [[orthology]]:
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*** [[orthology-galdieria.sulphuraria]]
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** [[pantograph]]:
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* [[FORMATETHFLIG-RXN]]
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*** [[galdieria.sulphuraria]]
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** 2 associated gene(s):
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*** [[CHC_T00009198001]]
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*** [[CHC_T00009198001_1]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[GLYOHMETRANS-RXN]]
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** 2 associated gene(s):
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*** [[CHC_T00009460001_1]]
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*** [[CHC_T00008323001_1]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[HOMOCYSMETB12-RXN]]
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** 1 associated gene(s):
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*** [[CHC_T00005524001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-ectocarpus_siliculosus]]
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* [[METHENYLTHFCYCLOHYDRO-RXN]]
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** 2 associated gene(s):
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*** [[CHC_T00008680001_1]]
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*** [[CHC_T00008670001_1]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[METHYLENETHFDEHYDROG-NADP-RXN]]
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** 3 associated gene(s):
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*** [[CHC_T00008670001_1]]
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*** [[CHC_T00008680001_1]]
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*** [[CHC_T00008680001]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[THYMIDYLATESYN-RXN]]
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** 1 associated gene(s):
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*** [[CHC_T00010030001_1]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=5-FORMYL-THF-CYCLO-LIGASE-RXN 5-FORMYL-THF-CYCLO-LIGASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=GCVMULTI-RXN GCVMULTI-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-6321 RXN-6321]
 
== External links  ==
 
== External links  ==
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* UNIPROT:
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* ARACYC:
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** [http://www.uniprot.org/uniprot/P52975 P52975]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-3841 PWY-3841]
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** [http://www.uniprot.org/uniprot/Q9CDG3 Q9CDG3]
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.uniprot.org/uniprot/Q9PM39 Q9PM39]
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{{#set: common name=folate transformations II}}
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** [http://www.uniprot.org/uniprot/Q9JX40 Q9JX40]
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{{#set: reaction found=8}}
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** [http://www.uniprot.org/uniprot/P43807 P43807]
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{{#set: total reaction=11}}
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** [http://www.uniprot.org/uniprot/P43808 P43808]
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{{#set: completion rate=73.0}}
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** [http://www.uniprot.org/uniprot/Q9PJA1 Q9PJA1]
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** [http://www.uniprot.org/uniprot/Q9CG17 Q9CG17]
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** [http://www.uniprot.org/uniprot/Q9JTD9 Q9JTD9]
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** [http://www.uniprot.org/uniprot/Q57599 Q57599]
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** [http://www.uniprot.org/uniprot/O44114 O44114]
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** [http://www.uniprot.org/uniprot/P0A7Y4 P0A7Y4]
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** [http://www.uniprot.org/uniprot/P10442 P10442]
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** [http://www.uniprot.org/uniprot/P13319 P13319]
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** [http://www.uniprot.org/uniprot/Q7LYY8 Q7LYY8]
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** [http://www.uniprot.org/uniprot/P0A2B9 P0A2B9]
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** [http://www.uniprot.org/uniprot/Q04740 Q04740]
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** [http://www.uniprot.org/uniprot/Q49050 Q49050]
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** [http://www.uniprot.org/uniprot/O69014 O69014]
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** [http://www.uniprot.org/uniprot/Q54222 Q54222]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-3.1.26.4}}
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{{#set: gene associated=CHC_T00007240001_1|CHC_T00003815001_1}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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Revision as of 16:04, 23 May 2018

Pathway PWY-3841

  • taxonomic range:
  • common name:
    • folate transformations II
  • Synonym(s):

Reaction(s) found

8 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links



Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-3841&oldid=13102"