Difference between revisions of "RXN-11210"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8991 RXN-8991] == * direction: ** REVERSIBLE * common name: ** 3-isopropylmalate dehydratase **...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11210 RXN-11210] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8991 RXN-8991] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11210 RXN-11210] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* common name:
+
* ec number:
−
** 3-isopropylmalate dehydratase
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** [http://enzyme.expasy.org/EC/3.5.1.6 EC-3.5.1.6]
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** 3-isopropylmalate dehydratase small subunit
+
 
* Synonym(s):
 
* Synonym(s):
−
** (2R,3S)-3-isopropylmalate hydro-lyase
 
−
** β-isopropylmalate dehydratase
 
−
** α-isopropylmalate isomerase
 
−
** 3-isopropylmalate hydro-lyase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE]][c] '''<=>''' 1 [[CPD-9451]][c] '''+''' 1 [[WATER]][c]
+
** 2 [[PROTON]][c] '''+''' 1 [[3-UREIDO-ISOBUTYRATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[CPD-471]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (2R,3S)-3-isopropylmalate[c] '''<=>''' 1 2-isopropylmaleate[c] '''+''' 1 H2O[c]
+
** 2 H+[c] '''+''' 1 (R)-3-ureido-isobutanoate[c] '''+''' 1 H2O[c] '''=>''' 1 CO2[c] '''+''' 1 ammonium[c] '''+''' 1 (R)-3-amino-2-methylpropanoate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00009087001]]
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* Gene: [[CHC_T00006316001_1]]
−
** ORIGINAL_GENOME
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** Source: [[orthology-ectocarpus_siliculosus]]
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***AUTOMATED-NAME-MATCH
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** Source: [[orthology-arabidopsis_thaliana]]
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* [[CHC_T00009087001_1]]
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−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
** [[pantograph]]-[[a.taliana]]
+
−
* [[CHC_T00009184001]]
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−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00009184001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
** [[pantograph]]-[[a.taliana]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[LEUSYN-PWY]], L-leucine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=LEUSYN-PWY LEUSYN-PWY]
+
* [[PWY-6430]], thymine degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6430 PWY-6430]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871]
+
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-arabidopsis_thaliana]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
*** [[a.taliana]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
* [[annotation]]:
+
*** Tool: [[pantograph]]
−
** [[pathwaytools]]:
+
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10676 10676]
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{{#set: ec number=EC-3.5.1.6}}
−
* LIGAND-RXN:
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{{#set: gene associated=CHC_T00006316001_1}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04001 R04001]
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{{#set: in pathway=PWY-6430}}
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=3-isopropylmalate dehydratase}}
+
−
{{#set: common name=3-isopropylmalate dehydratase small subunit}}
+
−
{{#set: common name=(2R,3S)-3-isopropylmalate hydro-lyase|&beta;-isopropylmalate dehydratase|&alpha;-isopropylmalate isomerase|3-isopropylmalate hydro-lyase}}
+
−
{{#set: gene associated=CHC_T00009087001|CHC_T00009087001_1|CHC_T00009184001|CHC_T00009184001_1}}
+
−
{{#set: in pathway=LEUSYN-PWY|PWY-6871}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=original_genome}}
 

Latest revision as of 16:05, 23 May 2018

Reaction RXN-11210

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6430, thymine degradation: PWY-6430
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-11210&oldid=13172"