Difference between revisions of "ORNITHINE-CYCLODEAMINASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLAMINOACYL-PEPTIDASE-RXN ACYLAMINOACYL-PEPTIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec numb...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE-CYCLODEAMINASE-RXN ORNITHINE-CYCLODEAMINASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec nu...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLAMINOACYL-PEPTIDASE-RXN ACYLAMINOACYL-PEPTIDASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE-CYCLODEAMINASE-RXN ORNITHINE-CYCLODEAMINASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.4.19.1 EC-3.4.19.1]
+
** [http://enzyme.expasy.org/EC/4.3.1.12 EC-4.3.1.12]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[N-Acetyl-Peptides]][c] '''=>''' 1 [[N-Acylated-Amino-Acids]][c] '''+''' 1 [[Peptides-holder]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[L-ORNITHINE]][c] '''=>''' 1 [[PRO]][c] '''+''' 1 [[AMMONIUM]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 an N-acylated peptide[c] '''=>''' 1 an N-acylated amino acid[c] '''+''' 1 a peptide[c] '''+''' 1 H+[c]
+
** 1 L-ornithine[c] '''=>''' 1 L-proline[c] '''+''' 1 ammonium[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[CHC_T00001116001_1]]
 
−
** [[pantograph]]-[[galdieria.sulphuraria]]
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[ORN-AMINOPENTANOATE-CAT-PWY]], L-ornithine degradation I (L-proline biosynthesis): [http://metacyc.org/META/NEW-IMAGE?object=ORN-AMINOPENTANOATE-CAT-PWY ORN-AMINOPENTANOATE-CAT-PWY]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[ARG-GLU-PWY]], L-arginine degradation VII (arginase 3 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-GLU-PWY ARG-GLU-PWY]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[gap-filling]]
−
** [[pantograph]]:
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24368 24368]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00671 R00671]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P25154 P25154]
+
** [http://www.uniprot.org/uniprot/Q59701 Q59701]
−
** [http://www.uniprot.org/uniprot/P39839 P39839]
+
** [http://www.uniprot.org/uniprot/P09773 P09773]
−
** [http://www.uniprot.org/uniprot/Q9UYB0 Q9UYB0]
+
** [http://www.uniprot.org/uniprot/P33728 P33728]
−
** [http://www.uniprot.org/uniprot/P13798 P13798]
+
** [http://www.uniprot.org/uniprot/O68052 O68052]
−
** [http://www.uniprot.org/uniprot/P19205 P19205]
+
** [http://www.uniprot.org/uniprot/Q9WWA2 Q9WWA2]
−
** [http://www.uniprot.org/uniprot/Q7M326 Q7M326]
+
−
** [http://www.uniprot.org/uniprot/P13676 P13676]
+
−
** [http://www.uniprot.org/uniprot/P80227 P80227]
+
−
** [http://www.uniprot.org/uniprot/P95915 P95915]
+
−
** [http://www.uniprot.org/uniprot/O13479 O13479]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-3.4.19.1}}
+
{{#set: ec number=EC-4.3.1.12}}
−
{{#set: gene associated=CHC_T00001116001_1}}
+
{{#set: in pathway=ORN-AMINOPENTANOATE-CAT-PWY|ARG-GLU-PWY}}
−
{{#set: in pathway=}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+
{{#set: reconstruction comment=added for gapfilling}}

Revision as of 16:24, 23 May 2018

Reaction ORNITHINE-CYCLODEAMINASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-ornithine[c] => 1 L-proline[c] + 1 ammonium[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links




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