Difference between revisions of "3.5.1.88-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1132 RXN0-1132] == * direction: ** LEFT-TO-RIGHT * common name: ** pyruvate dehydrogenase E1 a...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.88-RXN 3.5.1.88-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1132 RXN0-1132] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.88-RXN 3.5.1.88-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** pyruvate dehydrogenase E1 alpha subunit, mitochondrial precursor
 
−
** dihydrolipoamide dehydrogenase
 
−
** lipoamide dehydrogenase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.8.1.4 EC-1.8.1.4]
+
** [http://enzyme.expasy.org/EC/3.5.1.88 EC-3.5.1.88]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NAD]][c] '''+''' 1 [[Pyruvate-dehydrogenase-dihydrolipoate]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[Pyruvate-dehydrogenase-lipoate]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[FORMYL-L-METHIONYL-PEPTIDE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[METHIONYL-PEPTIDE]][c] '''+''' 1 [[FORMATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD+[c] '''+''' 1 a [pyruvate dehydrogenase E2 protein] N6-dihydrolipoyl-L-lysine[c] '''=>''' 1 NADH[c] '''+''' 1 a [pyruvate dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''+''' 1 H+[c]
+
** 1 a [protein] N-terminal-formyl-L-methionine[c] '''+''' 1 H2O[c] '''=>''' 1 an N-terminal L-methionyl-[protein][c] '''+''' 1 formate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00008441001]]
+
* Gene: [[CHC_T00007478001_1]]
−
** ORIGINAL_GENOME
+
** Source: [[orthology-galdieria.sulphuraria]]
−
***AUTOMATED-NAME-MATCH
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
* [[CHC_T00010287001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00008732001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00008441001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00010287001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PYRUVDEHYD-PWY]], pyruvate decarboxylation to acetyl CoA: [http://metacyc.org/META/NEW-IMAGE?object=PYRUVDEHYD-PWY PYRUVDEHYD-PWY]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
** [[pathwaytools]]:
+
*** Tool: [[pantograph]]
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R05635 R05635]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=pyruvate dehydrogenase E1 alpha subunit, mitochondrial precursor}}
+
{{#set: ec number=EC-3.5.1.88}}
−
{{#set: common name=dihydrolipoamide dehydrogenase}}
+
{{#set: gene associated=CHC_T00007478001_1}}
−
{{#set: common name=lipoamide dehydrogenase}}
+
{{#set: in pathway=}}
−
{{#set: ec number=EC-1.8.1.4}}
+
−
{{#set: gene associated=CHC_T00008441001|CHC_T00010287001_1|CHC_T00008732001|CHC_T00008441001_1|CHC_T00010287001}}
+
−
{{#set: in pathway=PYRUVDEHYD-PWY}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=original_genome}}
 

Revision as of 15:27, 23 May 2018

Reaction 3.5.1.88-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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