Difference between revisions of "CPD1F-114"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GSAAMINOTRANS-RXN GSAAMINOTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glutamate-1...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1F-114 CPD1F-114] == * smiles: ** CC(=CCCC(=CC=CC(=CC=CC(=CC=CC=C(C=CC=C(C=CC=C(CCC=C(C)C)C)...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GSAAMINOTRANS-RXN GSAAMINOTRANS-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1F-114 CPD1F-114] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** CC(=CCCC(=CC=CC(=CC=CC(=CC=CC=C(C=CC=C(C=CC=C(CCC=C(C)C)C)C)C)C)C)C)C
 +
* inchi key:
 +
** InChIKey=OAIJSZIZWZSQBC-GYZMGTAESA-N
 
* common name:
 
* common name:
−
** glutamate-1-semialdehyde 2,1-aminomutase
+
** all-trans-lycopene
−
* ec number:
+
* molecular weight:
−
** [http://enzyme.expasy.org/EC/5.4.3.8 EC-5.4.3.8]
+
** 536.882   
 
* Synonym(s):
 
* Synonym(s):
 +
** ψ,ψ-carotene
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[RXN1F-147]]
−
** 1 [[GLUTAMATE-1-SEMIALDEHYDE]][c] '''=>''' 1 [[5-AMINO-LEVULINATE]][c]
+
* [[RXN1F-150]]
−
* With common name(s):
+
== Reaction(s) known to produce the compound ==
−
** 1 (S)-4-amino-5-oxopentanoate[c] '''=>''' 1 5-aminolevulinate[c]
+
* [[RXN-8042]]
−
 
+
== Reaction(s) of unknown directionality ==
−
== Genes associated with this reaction  ==
+
* [[RXN-12414]]
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[CHC_T00008868001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
** [[pantograph]]-[[a.taliana]]
+
−
* [[CHC_T00008868001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
== Pathways  ==
+
−
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
+
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[galdieria.sulphuraria]]
+
−
*** [[a.taliana]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* LIPID_MAPS : LMPR01070257
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14265 14265]
+
* PUBCHEM:
−
* LIGAND-RXN:
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=446925 446925]
−
** [http://www.genome.jp/dbget-bin/www_bget?R02272 R02272]
+
* HMDB : HMDB03000
−
* UNIPROT:
+
* LIGAND-CPD:
−
** [http://www.uniprot.org/uniprot/P18492 P18492]
+
** [http://www.genome.jp/dbget-bin/www_bget?C05432 C05432]
−
** [http://www.uniprot.org/uniprot/P21267 P21267]
+
* CHEMSPIDER:
−
** [http://www.uniprot.org/uniprot/Q06741 Q06741]
+
** [http://www.chemspider.com/Chemical-Structure.394156.html 394156]
−
** [http://www.uniprot.org/uniprot/Q06774 Q06774]
+
* CHEBI:
−
** [http://www.uniprot.org/uniprot/P23893 P23893]
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15948 15948]
−
** [http://www.uniprot.org/uniprot/O26330 O26330]
+
* METABOLIGHTS : MTBLC15948
−
** [http://www.uniprot.org/uniprot/P30949 P30949]
+
{{#set: smiles=CC(=CCCC(=CC=CC(=CC=CC(=CC=CC=C(C=CC=C(C=CC=C(CCC=C(C)C)C)C)C)C)C)C)C}}
−
** [http://www.uniprot.org/uniprot/Q9PP70 Q9PP70]
+
{{#set: inchi key=InChIKey=OAIJSZIZWZSQBC-GYZMGTAESA-N}}
−
** [http://www.uniprot.org/uniprot/Q9JW10 Q9JW10]
+
{{#set: common name=all-trans-lycopene}}
−
** [http://www.uniprot.org/uniprot/O29027 O29027]
+
{{#set: molecular weight=536.882    }}
−
** [http://www.uniprot.org/uniprot/P45621 P45621]
+
{{#set: common name=ψ,ψ-carotene}}
−
** [http://www.uniprot.org/uniprot/P24630 P24630]
+
{{#set: consumed by=RXN1F-147|RXN1F-150}}
−
** [http://www.uniprot.org/uniprot/P31593 P31593]
+
{{#set: produced by=RXN-8042}}
−
** [http://www.uniprot.org/uniprot/Q39566 Q39566]
+
{{#set: reversible reaction associated=RXN-12414}}
−
** [http://www.uniprot.org/uniprot/P48247 P48247]
+
−
** [http://www.uniprot.org/uniprot/P46716 P46716]
+
−
** [http://www.uniprot.org/uniprot/Q40147 Q40147]
+
−
** [http://www.uniprot.org/uniprot/O74061 O74061]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=glutamate-1-semialdehyde 2,1-aminomutase}}
+
−
{{#set: ec number=EC-5.4.3.8}}
+
−
{{#set: gene associated=CHC_T00008868001_1|CHC_T00008868001}}
+
−
{{#set: in pathway=PWY-5188}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=original_genome}}
+

Revision as of 15:42, 23 May 2018

Metabolite CPD1F-114

  • smiles:
    • CC(=CCCC(=CC=CC(=CC=CC(=CC=CC=C(C=CC=C(C=CC=C(CCC=C(C)C)C)C)C)C)C)C)C
  • inchi key:
    • InChIKey=OAIJSZIZWZSQBC-GYZMGTAESA-N
  • common name:
    • all-trans-lycopene
  • molecular weight:
    • 536.882
  • Synonym(s):
    • ψ,ψ-carotene

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • LIPID_MAPS : LMPR01070257
  • PUBCHEM:
  • HMDB : HMDB03000
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC15948





Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CPD1F-114&oldid=15086"