Difference between revisions of "RXN-9944"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMIN-RXN GLUTAMIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ferredoxin-dependent...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9944 RXN-9944] == * direction: ** LEFT-TO-RIGHT * common name: ** ferredoxin-thioredoxin reduct...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMIN-RXN GLUTAMIN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9944 RXN-9944] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ferredoxin-dependent glutamate synthase
+
** ferredoxin-thioredoxin reductase beta subunit
−
** carbamoyl phosphate synthase small subunit
+
−
** GMP synthase (glutamine-hydrolysing)
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.5.1.38 EC-3.5.1.38]
+
** [http://enzyme.expasy.org/EC/1.8.7.2 EC-1.8.7.2]
−
** [http://enzyme.expasy.org/EC/3.5.1.2 EC-3.5.1.2]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[GLN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[GLT]][c]
+
** 2 [[Reduced-ferredoxins]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[Ox-Thioredoxin]][c] '''=>''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[Red-Thioredoxin]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-glutamine[c] '''+''' 1 H2O[c] '''=>''' 1 ammonium[c] '''+''' 1 L-glutamate[c]
+
** 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 2 H+[c] '''+''' 1 an oxidized thioredoxin[c] '''=>''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 a reduced thioredoxin[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00000667001_1]]
+
* Gene: [[CHC_1145]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[annotation-original_genome]]
−
* [[CHC_T00010056001_1]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_70]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_1080]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00004458001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00008596001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00009427001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00007798001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[GLUTAMINDEG-PWY]], L-glutamine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINDEG-PWY GLUTAMINDEG-PWY]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
 
−
** '''6''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-original_genome]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15889 15889]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00256 R00256]
+
** [http://www.genome.jp/dbget-bin/www_bget?R09502 R09502]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P10172 P10172]
+
−
** [http://www.uniprot.org/uniprot/P28492 P28492]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ferredoxin-dependent glutamate synthase}}
+
{{#set: common name=ferredoxin-thioredoxin reductase beta subunit}}
−
{{#set: common name=carbamoyl phosphate synthase small subunit}}
+
{{#set: ec number=EC-1.8.7.2}}
−
{{#set: common name=GMP synthase (glutamine-hydrolysing)}}
+
{{#set: gene associated=CHC_1145}}
−
{{#set: ec number=EC-3.5.1.38}}
+
{{#set: in pathway=}}
−
{{#set: ec number=EC-3.5.1.2}}
+
−
{{#set: gene associated=CHC_T00000667001_1|CHC_T00010056001_1|CHC_70|CHC_1080|CHC_T00004458001_1|CHC_T00008596001_1|CHC_T00009427001|CHC_T00007798001_1}}
+
−
{{#set: in pathway=GLUTAMINDEG-PWY|CITRULBIO-PWY}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-original_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=original_genome}}
 

Latest revision as of 16:48, 23 May 2018

Reaction RXN-9944

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ferredoxin-thioredoxin reductase beta subunit
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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