Difference between revisions of "5.99.1.2-RXN"
From metabolic_network
(Created page with "Category:Gene == Gene CHC_T00004399001_1 == * Synonym(s): == Reactions associated == * RXN-15556 ** pantograph-galdieria.sulphuraria * UBIQUITIN--PROTEIN-LI...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.99.1.2-RXN 5.99.1.2-RXN] == * direction: ** REVERSIBLE * common name: ** DNA topoisomerase I Mito...") |
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− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.99.1.2-RXN 5.99.1.2-RXN] == |
+ | * direction: | ||
+ | ** REVERSIBLE | ||
+ | * common name: | ||
+ | ** DNA topoisomerase I Mitochondrial | ||
+ | ** Putative DNA topoisomerase I | ||
+ | ** DNA topoisomerase | ||
+ | * ec number: | ||
+ | ** [http://enzyme.expasy.org/EC/5.99.1.2 EC-5.99.1.2] | ||
* Synonym(s): | * Synonym(s): | ||
− | == | + | == Reaction Formula == |
− | * [[ | + | * With identifiers: |
− | ** [[ | + | ** 1 [[Negatively-super-coiled-DNAs]][c] '''<=>''' 1 [[Relaxed-DNAs]][c] |
− | * [[ | + | * With common name(s): |
− | ** [[ | + | ** 1 a negatively supercoiled DNA[c] '''<=>''' 1 a relaxed DNA[c] |
− | == Pathways | + | |
− | * [[ | + | == Genes associated with this reaction == |
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * Gene: [[CHC_T00007354001_1]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00006880001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00008867001]] | ||
+ | ** Source: [[annotation-original_genome]] | ||
+ | *** Assignment: AUTOMATED-NAME-MATCH | ||
+ | * Gene: [[CHC_T00010204001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00002964001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00008579001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00010204001]] | ||
+ | ** Source: [[annotation-original_genome]] | ||
+ | *** Assignment: AUTOMATED-NAME-MATCH | ||
+ | * Gene: [[CHC_T00008579001]] | ||
+ | ** Source: [[annotation-original_genome]] | ||
+ | *** Assignment: AUTOMATED-NAME-MATCH | ||
+ | == Pathways == | ||
+ | == Reconstruction information == | ||
+ | * Category: [[orthology]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | * Category: [[annotation]] | ||
+ | ** Source: [[annotation-original_genome]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
− | {{#set: | + | * UNIPROT: |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/Q7M0H8 Q7M0H8] |
+ | ** [http://www.uniprot.org/uniprot/Q07050 Q07050] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JWZ5 Q9JWZ5] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59046 Q59046] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PLZ2 Q9PLZ2] | ||
+ | ** [http://www.uniprot.org/uniprot/P47368 P47368] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CG80 Q9CG80] | ||
+ | ** [http://www.uniprot.org/uniprot/P43704 P43704] | ||
+ | ** [http://www.uniprot.org/uniprot/P43012 P43012] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A620 P0A620] | ||
+ | ** [http://www.uniprot.org/uniprot/P04786 P04786] | ||
+ | ** [http://www.uniprot.org/uniprot/P13099 P13099] | ||
+ | ** [http://www.uniprot.org/uniprot/P06612 P06612] | ||
+ | ** [http://www.uniprot.org/uniprot/P11387 P11387] | ||
+ | ** [http://www.uniprot.org/uniprot/P07799 P07799] | ||
+ | ** [http://www.uniprot.org/uniprot/P93119 P93119] | ||
+ | ** [http://www.uniprot.org/uniprot/O13463 O13463] | ||
+ | ** [http://www.uniprot.org/uniprot/Q94705 Q94705] | ||
+ | ** [http://www.uniprot.org/uniprot/Q04750 Q04750] | ||
+ | ** [http://www.uniprot.org/uniprot/P14294 P14294] | ||
+ | ** [http://www.uniprot.org/uniprot/P30181 P30181] | ||
+ | ** [http://www.uniprot.org/uniprot/P34185 P34185] | ||
+ | ** [http://www.uniprot.org/uniprot/P30189 P30189] | ||
+ | ** [http://www.uniprot.org/uniprot/P40114 P40114] | ||
+ | ** [http://www.uniprot.org/uniprot/P41511 P41511] | ||
+ | ** [http://www.uniprot.org/uniprot/Q8I3Z9 Q8I3Z9] | ||
+ | ** [http://www.uniprot.org/uniprot/Q26024 Q26024] | ||
+ | ** [http://www.uniprot.org/uniprot/Q27529 Q27529] | ||
+ | ** [http://www.uniprot.org/uniprot/P41512 P41512] | ||
+ | ** [http://www.uniprot.org/uniprot/O24307 O24307] | ||
+ | ** [http://www.uniprot.org/uniprot/P71196 P71196] | ||
+ | ** [http://www.uniprot.org/uniprot/O70157 O70157] | ||
+ | ** [http://www.uniprot.org/uniprot/O60126 O60126] | ||
+ | ** [http://www.uniprot.org/uniprot/O61660 O61660] | ||
+ | {{#set: direction=REVERSIBLE}} | ||
+ | {{#set: common name=DNA topoisomerase I Mitochondrial}} | ||
+ | {{#set: common name=Putative DNA topoisomerase I}} | ||
+ | {{#set: common name=DNA topoisomerase}} | ||
+ | {{#set: ec number=EC-5.99.1.2}} | ||
+ | {{#set: gene associated=CHC_T00007354001_1|CHC_T00006880001_1|CHC_T00008867001|CHC_T00010204001_1|CHC_T00002964001_1|CHC_T00008579001_1|CHC_T00010204001|CHC_T00008579001}} | ||
+ | {{#set: in pathway=}} | ||
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Revision as of 15:53, 23 May 2018
Contents
Reaction 5.99.1.2-RXN
- direction:
- REVERSIBLE
- common name:
- DNA topoisomerase I Mitochondrial
- Putative DNA topoisomerase I
- DNA topoisomerase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 Negatively-super-coiled-DNAs[c] <=> 1 Relaxed-DNAs[c]
- With common name(s):
- 1 a negatively supercoiled DNA[c] <=> 1 a relaxed DNA[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00007354001_1
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00006880001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00008867001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00010204001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00002964001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00008579001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00010204001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00008579001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
External links
- UNIPROT: