Difference between revisions of "RXN-9384"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6443 PWY-6443] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-31...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9384 RXN-9384] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * With ident...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6443 PWY-6443] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9384 RXN-9384] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
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** REVERSIBLE
* common name:
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** benzoate biosynthesis I (CoA-dependent, β-oxidative)
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* Synonym(s):
 
* Synonym(s):
** benzoic acid biosynthesis
 
  
== Reaction(s) found ==
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== Reaction Formula ==
* '''2''' reaction(s) found
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* With identifiers:
** [[RXN-2002]]
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** 1 [[HS]][c] '''+''' 1 [[O-SUCCINYL-L-HOMOSERINE]][c] '''<=>''' 1 [[SUC]][c] '''+''' 1 [[HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
** [[PWY-6457]]
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* With common name(s):
== Reaction(s) not found ==
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** 1 hydrogen sulfide[c] '''+''' 1 O-succinyl-L-homoserine[c] '''<=>''' 1 succinate[c] '''+''' 1 L-homocysteine[c] '''+''' 1 H+[c]
* '''6''' reaction(s) not found
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-6724 RXN-6724]
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== Genes associated with this reaction ==
** [http://metacyc.org/META/NEW-IMAGE?object=BENZOATE--COA-LIGASE-RXN BENZOATE--COA-LIGASE-RXN]
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Genes have been associated with this reaction based on different elements listed below.
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-2003 RXN-2003]
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* Gene: [[CHC_T00004833001_1]]
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-2006 RXN-2006]
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** Source: [[orthology-ectocarpus_siliculosus]]
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-2005 RXN-2005]
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** Source: [[orthology-arabidopsis_thaliana]]
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-11272 RXN-11272]
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* Gene: [[CHC_T00003042001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00007345001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00005639001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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** Source: [[orthology-arabidopsis_thaliana]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-arabidopsis_thaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* PLANTCYC : PWY-6443
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* RHEA:
{{#set: taxonomic range=TAX-3193}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27826 27826]
{{#set: common name=benzoate biosynthesis I (CoA-dependent, &beta;-oxidative)}}
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* LIGAND-RXN:
{{#set: common name=benzoic acid biosynthesis}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01288 R01288]
{{#set: reaction found=2}}
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{{#set: direction=REVERSIBLE}}
{{#set: reaction not found=6}}
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{{#set: gene associated=CHC_T00004833001_1|CHC_T00003042001_1|CHC_T00007345001_1|CHC_T00005639001_1}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:57, 23 May 2018

Reaction RXN-9384

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 hydrogen sulfide[c] + 1 O-succinyl-L-homoserine[c] <=> 1 succinate[c] + 1 L-homocysteine[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links