Difference between revisions of "GARTRANSFORMYL2-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-4702 CPD-4702] == * smiles: ** CC(C)=CCCC(C)[CH]3(CC[CH]4(C2(CC[CH]1(C(C([O-])=O)C(O)CCC(C)...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GARTRANSFORMYL2-RXN GARTRANSFORMYL2-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://e...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-4702 CPD-4702] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GARTRANSFORMYL2-RXN GARTRANSFORMYL2-RXN] ==
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* smiles:
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* direction:
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** CC(C)=CCCC(C)[CH]3(CC[CH]4(C2(CC[CH]1(C(C([O-])=O)C(O)CCC(C)1C=2CCC(C)34))))
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** LEFT-TO-RIGHT
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* inchi key:
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* ec number:
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** InChIKey=JHIWIFRQJXLNEU-GSQAGGHASA-M
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** [http://enzyme.expasy.org/EC/2.1.2 EC-2.1.2]
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* common name:
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** 4α-carboxy-5α-cholesta-8,24-dien-3β-ol
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* molecular weight:
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** 427.646   
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN66-318]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[ATP]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[5-PHOSPHO-RIBOSYL-GLYCINEAMIDE]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[5-P-RIBOSYL-N-FORMYLGLYCINEAMIDE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
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* [[RXN-13709]]
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* With common name(s):
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* [[RXN66-317]]
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** 1 ATP[c] '''+''' 1 formate[c] '''+''' 1 N1-(5-phospho-β-D-ribosyl)glycinamide[c] '''=>''' 1 phosphate[c] '''+''' 1 N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00006609001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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== Pathways  ==
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* [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6122 PWY-6122]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6277 PWY-6277]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90659076 90659076]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24829 24829]
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{{#set: smiles=CC(C)=CCCC(C)[CH]3(CC[CH]4(C2(CC[CH]1(C(C([O-])=O)C(O)CCC(C)1C=2CCC(C)34))))}}
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* LIGAND-RXN:
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{{#set: inchi key=InChIKey=JHIWIFRQJXLNEU-GSQAGGHASA-M}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06974 R06974]
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{{#set: common name=4α-carboxy-5α-cholesta-8,24-dien-3β-ol}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: molecular weight=427.646    }}
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{{#set: ec number=EC-2.1.2}}
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{{#set: consumed by=RXN66-318}}
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{{#set: gene associated=CHC_T00006609001_1}}
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{{#set: produced by=RXN-13709|RXN66-317}}
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{{#set: in pathway=PWY-6122|PWY-6277}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:08, 23 May 2018

Reaction GARTRANSFORMYL2-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6122, 5-aminoimidazole ribonucleotide biosynthesis II: PWY-6122
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6277, superpathway of 5-aminoimidazole ribonucleotide biosynthesis: PWY-6277
    • 7 reactions found over 9 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=GARTRANSFORMYL2-RXN&oldid=16296"