Difference between revisions of "P42-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14285 RXN-14285] == * direction: ** LEFT-TO-RIGHT * common name: ** Starch phosphorylase * ec n...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-22...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14285 RXN-14285] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-224756]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183939 TAX-183939]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183925 TAX-183925]
 
* common name:
 
* common name:
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** Starch phosphorylase
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** incomplete reductive TCA cycle
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* ec number:
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** [http://enzyme.expasy.org/EC/2.4.1.1 EC-2.4.1.1]
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* Synonym(s):
 
* Synonym(s):
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** citric acid cycle variant
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** tricarboxylic acid cycle variant
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** TCA cycle variation I
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** incomplete reductive tricarboxylic acid cycle
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''5''' reactions found over '''7''' reactions in the full pathway
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** 1 [[Pi]][c] '''+''' 1 [[MALTOHEXAOSE]][c] '''=>''' 1 [[GLC-1-P]][c] '''+''' 1 [[MALTOPENTAOSE]][c]
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* [[FUMHYDR-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 phosphate[c] '''+''' 1 maltohexaose[c] '''=>''' 1 α-D-glucopyranose 1-phosphate[c] '''+''' 1 maltopentaose[c]
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*** [[CHC_T00008951001_1]]
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*** [[CHC_T00008951001]]
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== Genes associated with this reaction  ==
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** 4 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-original_genome]]
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* [[CHC_T00008988001]]
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*** [[orthology-arabidopsis_thaliana]]
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** ORIGINAL_GENOME
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*** [[orthology-ectocarpus_siliculosus]]
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***AUTOMATED-NAME-MATCH
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*** [[orthology-galdieria.sulphuraria]]
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* [[CHC_T00008988001_1]]
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* [[MALATE-DEH-RXN]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** 6 associated gene(s):
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== Pathways  ==
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*** [[CHC_T00008733001]]
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== Reconstruction information  ==
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*** [[CHC_T00009350001_1]]
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* [[orthology]]:
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*** [[CHC_T00009173001_1]]
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** [[pantograph]]:
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*** [[CHC_T00009292001_1]]
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*** [[galdieria.sulphuraria]]
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*** [[CHC_T00008733001_1]]
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* [[annotation]]:
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*** [[CHC_T00008600001_1]]
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** [[pathwaytools]]:
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** 4 reconstruction source(s) associated:
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*** [[original_genome]]
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*** [[annotation-original_genome]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[PYRUFLAVREDUCT-RXN]]
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** 9 associated gene(s):
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*** [[CHC_T00008442001_1]]
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*** [[CHC_T00003376001_1]]
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*** [[CHC_T00001730001_1]]
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*** [[CHC_T00001454001_1]]
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*** [[CHC_T00003402001_1]]
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*** [[CHC_T00000866001_1]]
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*** [[CHC_T00009061001_1]]
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*** [[CHC_T00008758001_1]]
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*** [[CHC_T00000865001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-ectocarpus_siliculosus]]
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* [[PYRUVATE-CARBOXYLASE-RXN]]
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** 1 associated gene(s):
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*** [[CHC_T00009426001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-ectocarpus_siliculosus]]
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* [[SUCCCOASYN-RXN]]
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** 2 associated gene(s):
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*** [[CHC_T00009212001_1]]
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*** [[CHC_T00008602001_1]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=2-OXOGLUTARATE-SYNTHASE-RXN 2-OXOGLUTARATE-SYNTHASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-224756}}
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{{#set: common name=Starch phosphorylase}}
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{{#set: taxonomic range=TAX-183939}}
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{{#set: ec number=EC-2.4.1.1}}
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{{#set: taxonomic range=TAX-183925}}
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{{#set: gene associated=CHC_T00008988001|CHC_T00008988001_1}}
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{{#set: common name=incomplete reductive TCA cycle}}
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{{#set: in pathway=}}
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{{#set: common name=citric acid cycle variant|tricarboxylic acid cycle variant|TCA cycle variation I|incomplete reductive tricarboxylic acid cycle}}
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{{#set: reconstruction category=orthology}}
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{{#set: reaction found=5}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: total reaction=7}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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{{#set: completion rate=71.0}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Revision as of 17:12, 23 May 2018

Pathway P42-PWY

  • taxonomic range:
  • common name:
    • incomplete reductive TCA cycle
  • Synonym(s):
    • citric acid cycle variant
    • tricarboxylic acid cycle variant
    • TCA cycle variation I
    • incomplete reductive tricarboxylic acid cycle

Reaction(s) found

5 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=P42-PWY&oldid=16476"