Difference between revisions of "PWY-6854"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGININE--TRNA-LIGASE-RXN ARGININE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6854 PWY-6854] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGININE--TRNA-LIGASE-RXN ARGININE--TRNA-LIGASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6854 PWY-6854] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** Arginyl-tRNA synthetase
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** ethylene biosynthesis III (microbes)
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* ec number:
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** [http://enzyme.expasy.org/EC/6.1.1.19 EC-6.1.1.19]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''7''' reactions in the full pathway
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** 1 [[ARG-tRNAs]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[ARG]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Charged-ARG-tRNAs]][c] '''+''' 1 [[AMP]][c]
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* [[FERRIC-CHELATE-REDUCTASE-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 a tRNAarg[c] '''+''' 1 ATP[c] '''+''' 1 L-arginine[c] '''=>''' 1 diphosphate[c] '''+''' 1 an L-arginyl-[tRNAarg][c] '''+''' 1 AMP[c]
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*** [[CHC_T00003126001_1]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-galdieria.sulphuraria]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[SUPEROX-DISMUT-RXN]]
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* [[CHC_T00010186001]]
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** 4 associated gene(s):
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** ORIGINAL_GENOME
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*** [[CHC_T00003067001_1]]
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***AUTOMATED-NAME-MATCH
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*** [[CHC_T00005214001_1]]
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* [[CHC_T00010186001_1]]
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*** [[CHC_T00008473001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[CHC_T00010182001_1]]
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== Pathways  ==
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** 2 reconstruction source(s) associated:
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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*** [[orthology-ectocarpus_siliculosus]]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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*** [[orthology-galdieria.sulphuraria]]
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== Reconstruction information  ==
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== Reaction(s) not found ==
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* [[orthology]]:
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* [http://metacyc.org/META/NEW-IMAGE?object=R15-RXN R15-RXN]
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** [[pantograph]]:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12539 RXN-12539]
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*** [[galdieria.sulphuraria]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12540 RXN-12540]
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* [[annotation]]:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12541 RXN-12541]
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** [[pathwaytools]]:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14960 RXN-14960]
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*** [[original_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20301 20301]
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{{#set: taxonomic range=TAX-2}}
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* LIGAND-RXN:
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{{#set: common name=ethylene biosynthesis III (microbes)}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03646 R03646]
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{{#set: reaction found=2}}
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* UNIPROT:
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{{#set: total reaction=7}}
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** [http://www.uniprot.org/uniprot/P40329 P40329]
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{{#set: completion rate=29.0}}
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** [http://www.uniprot.org/uniprot/P35868 P35868]
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** [http://www.uniprot.org/uniprot/P43832 P43832]
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** [http://www.uniprot.org/uniprot/O51540 O51540]
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** [http://www.uniprot.org/uniprot/O67068 O67068]
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** [http://www.uniprot.org/uniprot/O59147 O59147]
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** [http://www.uniprot.org/uniprot/O83803 O83803]
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** [http://www.uniprot.org/uniprot/Q9ZE81 Q9ZE81]
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** [http://www.uniprot.org/uniprot/Q9PNC0 Q9PNC0]
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** [http://www.uniprot.org/uniprot/Q9X0H8 Q9X0H8]
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** [http://www.uniprot.org/uniprot/P46906 P46906]
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** [http://www.uniprot.org/uniprot/Q57689 Q57689]
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** [http://www.uniprot.org/uniprot/O27496 O27496]
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** [http://www.uniprot.org/uniprot/Q9JTM7 Q9JTM7]
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** [http://www.uniprot.org/uniprot/Q9CE12 Q9CE12]
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** [http://www.uniprot.org/uniprot/P56128 P56128]
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** [http://www.uniprot.org/uniprot/P47618 P47618]
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** [http://www.uniprot.org/uniprot/Q9ZMB9 Q9ZMB9]
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** [http://www.uniprot.org/uniprot/Q08888 Q08888]
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** [http://www.uniprot.org/uniprot/P54136 P54136]
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** [http://www.uniprot.org/uniprot/P38714 P38714]
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** [http://www.uniprot.org/uniprot/Q05506 Q05506]
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** [http://www.uniprot.org/uniprot/P75222 P75222]
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** [http://www.uniprot.org/uniprot/P11875 P11875]
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** [http://www.uniprot.org/uniprot/O23247 O23247]
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** [http://www.uniprot.org/uniprot/O74781 O74781]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Arginyl-tRNA synthetase}}
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{{#set: ec number=EC-6.1.1.19}}
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{{#set: gene associated=CHC_T00010186001|CHC_T00010186001_1}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Revision as of 16:13, 23 May 2018

Pathway PWY-6854

  • taxonomic range:
  • common name:
    • ethylene biosynthesis III (microbes)
  • Synonym(s):

Reaction(s) found

2 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-6854&oldid=16497"