Difference between revisions of "PWY-6964"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DNA-DIRECTED-DNA-POLYMERASE-RXN DNA-DIRECTED-DNA-POLYMERASE-RXN] == * direction: ** LEFT-TO-RIGHT *...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6964 PWY-6964] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-11...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DNA-DIRECTED-DNA-POLYMERASE-RXN DNA-DIRECTED-DNA-POLYMERASE-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6964 PWY-6964] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2836 TAX-2836]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
−
** DNA polymerase zeta catalytic subunit
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** ammonia assimilation cycle II
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** DNA polymerase alpha catalytic subunit
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−
** DNA Polymerase Iota
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−
* ec number:
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** [http://enzyme.expasy.org/EC/2.7.7.7 EC-2.7.7.7]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** GS/GOGAT pathway
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''2''' reactions in the full pathway
−
** 1 [[Deoxy-Ribonucleoside-Triphosphates]][c] '''+''' 1 [[DNA-N]][c] '''=>''' 1 [[DNA-N]][c] '''+''' 1 [[PPI]][c]
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* [[GLUTAMATE-SYNTHASE-FERREDOXIN-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 a 2'-deoxyribonucleoside 5'-triphosphate[c] '''+''' 1 DNAn[c] '''=>''' 1 DNAn[c] '''+''' 1 diphosphate[c]
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*** [[CHC_1080]]
−
 
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-original_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[GLUTAMINESYN-RXN]]
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* [[CHC_T00010052001]]
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** 3 associated gene(s):
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** ORIGINAL_GENOME
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*** [[CHC_T00005454001_1]]
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***AUTOMATED-NAME-MATCH
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*** [[CHC_T00010135001_1]]
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* [[CHC_T00008362001_1]]
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*** [[CHC_T00005451001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** 3 reconstruction source(s) associated:
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* [[CHC_T00000882001_1]]
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*** [[orthology-arabidopsis_thaliana]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[CHC_T00005795001_1]]
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*** [[orthology-galdieria.sulphuraria]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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== Reaction(s) not found ==
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* [[CHC_T00009322001_1]]
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−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00003199001_1]]
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−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00010052001_1]]
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−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00003762001_1]]
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−
** [[pantograph]]-[[galdieria.sulphuraria]]
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−
* [[CHC_T00009322001]]
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−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
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−
* [[CHC_T00002866001_1]]
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−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00001061001_1]]
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−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00007205001_1]]
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−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00005408001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00008362001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00008124001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
== Pathways  ==
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[galdieria.sulphuraria]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
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{{#set: taxonomic range=TAX-1117}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00379 R00379]
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{{#set: taxonomic range=TAX-2836}}
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* UNIPROT:
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{{#set: taxonomic range=TAX-33090}}
−
** [http://www.uniprot.org/uniprot/P06856 P06856]
+
{{#set: common name=ammonia assimilation cycle II}}
−
** [http://www.uniprot.org/uniprot/P06766 P06766]
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{{#set: common name=GS/GOGAT pathway}}
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** [http://www.uniprot.org/uniprot/P15801 P15801]
+
{{#set: reaction found=2}}
−
** [http://www.uniprot.org/uniprot/P59200 P59200]
+
{{#set: total reaction=2}}
−
** [http://www.uniprot.org/uniprot/P19821 P19821]
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{{#set: completion rate=100.0}}
−
** [http://www.uniprot.org/uniprot/P14284 P14284]
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−
** [http://www.uniprot.org/uniprot/P21951 P21951]
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−
** [http://www.uniprot.org/uniprot/P28339 P28339]
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−
** [http://www.uniprot.org/uniprot/P52027 P52027]
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−
** [http://www.uniprot.org/uniprot/P28340 P28340]
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−
** [http://www.uniprot.org/uniprot/P30321 P30321]
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−
** [http://www.uniprot.org/uniprot/P28630 P28630]
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−
** [http://www.uniprot.org/uniprot/P28905 P28905]
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−
** [http://www.uniprot.org/uniprot/Q36586 Q36586]
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−
** [http://www.uniprot.org/uniprot/P28632 P28632]
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−
** [http://www.uniprot.org/uniprot/Q23687 Q23687]
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−
** [http://www.uniprot.org/uniprot/Q59690 Q59690]
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−
** [http://www.uniprot.org/uniprot/P43744 P43744]
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−
** [http://www.uniprot.org/uniprot/O28552 O28552]
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−
** [http://www.uniprot.org/uniprot/O57863 O57863]
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−
** [http://www.uniprot.org/uniprot/Q9PPI9 Q9PPI9]
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−
** [http://www.uniprot.org/uniprot/Q9JW44 Q9JW44]
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−
** [http://www.uniprot.org/uniprot/Q9JVX8 Q9JVX8]
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−
** [http://www.uniprot.org/uniprot/P05649 P05649]
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−
** [http://www.uniprot.org/uniprot/P27903 P27903]
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−
** [http://www.uniprot.org/uniprot/P33611 P33611]
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−
** [http://www.uniprot.org/uniprot/Q59691 Q59691]
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−
** [http://www.uniprot.org/uniprot/P43745 P43745]
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−
** [http://www.uniprot.org/uniprot/O27456 O27456]
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−
** [http://www.uniprot.org/uniprot/Q9CJJ1 Q9CJJ1]
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−
** [http://www.uniprot.org/uniprot/Q9JV62 Q9JV62]
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−
** [http://www.uniprot.org/uniprot/P47659 P47659]
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−
** [http://www.uniprot.org/uniprot/Q59024 Q59024]
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−
** [http://www.uniprot.org/uniprot/Q9JTS1 Q9JTS1]
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−
** [http://www.uniprot.org/uniprot/P06538 P06538]
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** [http://www.uniprot.org/uniprot/P04495 P04495]
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−
** [http://www.uniprot.org/uniprot/P09854 P09854]
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−
** [http://www.uniprot.org/uniprot/P07918 P07918]
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−
** [http://www.uniprot.org/uniprot/P09252 P09252]
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−
** [http://www.uniprot.org/uniprot/P03198 P03198]
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−
** [http://www.uniprot.org/uniprot/P28857 P28857]
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−
** [http://www.uniprot.org/uniprot/P07917 P07917]
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−
** [http://www.uniprot.org/uniprot/P08546 P08546]
+
−
** [http://www.uniprot.org/uniprot/P28858 P28858]
+
−
** [http://www.uniprot.org/uniprot/P04293 P04293]
+
−
** [http://www.uniprot.org/uniprot/P28859 P28859]
+
−
** [http://www.uniprot.org/uniprot/P04292 P04292]
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−
** [http://www.uniprot.org/uniprot/P27172 P27172]
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−
** [http://www.uniprot.org/uniprot/P10479 P10479]
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−
** [http://www.uniprot.org/uniprot/P06225 P06225]
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−
** [http://www.uniprot.org/uniprot/P04415 P04415]
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−
** [http://www.uniprot.org/uniprot/P19822 P19822]
+
−
** [http://www.uniprot.org/uniprot/P00581 P00581]
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−
** [http://www.uniprot.org/uniprot/P10443 P10443]
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−
** [http://www.uniprot.org/uniprot/P0A988 P0A988]
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−
** [http://www.uniprot.org/uniprot/P06710 P06710]
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−
** [http://www.uniprot.org/uniprot/P00582 P00582]
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−
** [http://www.uniprot.org/uniprot/P09884 P09884]
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−
** [http://www.uniprot.org/uniprot/P18131 P18131]
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−
** [http://www.uniprot.org/uniprot/P0A121 P0A121]
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−
** [http://www.uniprot.org/uniprot/P20509 P20509]
+
−
** [http://www.uniprot.org/uniprot/Q91EK5 Q91EK5]
+
−
** [http://www.uniprot.org/uniprot/P28040 P28040]
+
−
** [http://www.uniprot.org/uniprot/P43741 P43741]
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−
** [http://www.uniprot.org/uniprot/O28484 O28484]
+
−
** [http://www.uniprot.org/uniprot/P33761 P33761]
+
−
** [http://www.uniprot.org/uniprot/Q9V2F4 Q9V2F4]
+
−
** [http://www.uniprot.org/uniprot/Q9PJA9 Q9PJA9]
+
−
** [http://www.uniprot.org/uniprot/Q9JTI9 Q9JTI9]
+
−
** [http://www.uniprot.org/uniprot/Q9JTM2 Q9JTM2]
+
−
** [http://www.uniprot.org/uniprot/P03680 P03680]
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−
** [http://www.uniprot.org/uniprot/P06950 P06950]
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−
** [http://www.uniprot.org/uniprot/P43746 P43746]
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−
** [http://www.uniprot.org/uniprot/Q58113 Q58113]
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−
** [http://www.uniprot.org/uniprot/P13267 P13267]
+
−
** [http://www.uniprot.org/uniprot/Q50790 Q50790]
+
−
** [http://www.uniprot.org/uniprot/Q9V2F3 Q9V2F3]
+
−
** [http://www.uniprot.org/uniprot/Q9PIG2 Q9PIG2]
+
−
** [http://www.uniprot.org/uniprot/Q9JWB1 Q9JWB1]
+
−
** [http://www.uniprot.org/uniprot/Q9CDS1 Q9CDS1]
+
−
** [http://www.uniprot.org/uniprot/P54098 P54098]
+
−
** [http://www.uniprot.org/uniprot/Q9PND8 Q9PND8]
+
−
** [http://www.uniprot.org/uniprot/Q9PI56 Q9PI56]
+
−
** [http://www.uniprot.org/uniprot/Q9CIG3 Q9CIG3]
+
−
** [http://www.uniprot.org/uniprot/P43743 P43743]
+
−
** [http://www.uniprot.org/uniprot/O27579 O27579]
+
−
** [http://www.uniprot.org/uniprot/Q9JVB2 Q9JVB2]
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−
** [http://www.uniprot.org/uniprot/Q9CI70 Q9CI70]
+
−
** [http://www.uniprot.org/uniprot/P49005 P49005]
+
−
** [http://www.uniprot.org/uniprot/Q08880 Q08880]
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−
** [http://www.uniprot.org/uniprot/P49004 P49004]
+
−
** [http://www.uniprot.org/uniprot/Q62085 Q62085]
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−
** [http://www.uniprot.org/uniprot/P43749 P43749]
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−
** [http://www.uniprot.org/uniprot/P03007 P03007]
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−
** [http://www.uniprot.org/uniprot/P29439 P29439]
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** [http://www.uniprot.org/uniprot/P30314 P30314]
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−
** [http://www.uniprot.org/uniprot/P95690 P95690]
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−
** [http://www.uniprot.org/uniprot/O00874 O00874]
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−
** [http://www.uniprot.org/uniprot/O50607 O50607]
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** [http://www.uniprot.org/uniprot/Q9P9N2 Q9P9N2]
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** [http://www.uniprot.org/uniprot/Q9P9N1 Q9P9N1]
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** [http://www.uniprot.org/uniprot/P21189 P21189]
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** [http://www.uniprot.org/uniprot/P12899 P12899]
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** [http://www.uniprot.org/uniprot/P11292 P11292]
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** [http://www.uniprot.org/uniprot/P12898 P12898]
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** [http://www.uniprot.org/uniprot/P24024 P24024]
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** [http://www.uniprot.org/uniprot/P17192 P17192]
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** [http://www.uniprot.org/uniprot/P03160 P03160]
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** [http://www.uniprot.org/uniprot/P06275 P06275]
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** [http://www.uniprot.org/uniprot/P12900 P12900]
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** [http://www.uniprot.org/uniprot/Q66400 Q66400]
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** [http://www.uniprot.org/uniprot/P13846 P13846]
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** [http://www.uniprot.org/uniprot/P17394 P17394]
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** [http://www.uniprot.org/uniprot/P17395 P17395]
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** [http://www.uniprot.org/uniprot/P17393 P17393]
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** [http://www.uniprot.org/uniprot/P17100 P17100]
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** [http://www.uniprot.org/uniprot/P03161 P03161]
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** [http://www.uniprot.org/uniprot/P03156 P03156]
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** [http://www.uniprot.org/uniprot/P03159 P03159]
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** [http://www.uniprot.org/uniprot/P03155 P03155]
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** [http://www.uniprot.org/uniprot/P03157 P03157]
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** [http://www.uniprot.org/uniprot/P31870 P31870]
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** [http://www.uniprot.org/uniprot/P30028 P30028]
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** [http://www.uniprot.org/uniprot/P17396 P17396]
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** [http://www.uniprot.org/uniprot/P17193 P17193]
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** [http://www.uniprot.org/uniprot/P24117 P24117]
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** [http://www.uniprot.org/uniprot/P19894 P19894]
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** [http://www.uniprot.org/uniprot/P22838 P22838]
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** [http://www.uniprot.org/uniprot/P21174 P21174]
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** [http://www.uniprot.org/uniprot/P30318 P30318]
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−
** [http://www.uniprot.org/uniprot/Q05486 Q05486]
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** [http://www.uniprot.org/uniprot/Q04957 Q04957]
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** [http://www.uniprot.org/uniprot/Q01843 Q01843]
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−
** [http://www.uniprot.org/uniprot/Q9WT26 Q9WT26]
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** [http://www.uniprot.org/uniprot/P15436 P15436]
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** [http://www.uniprot.org/uniprot/Q9XMH7 Q9XMH7]
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** [http://www.uniprot.org/uniprot/P22374 P22374]
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** [http://www.uniprot.org/uniprot/Q7M007 Q7M007]
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−
** [http://www.uniprot.org/uniprot/P20311 P20311]
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** [http://www.uniprot.org/uniprot/P09122 P09122]
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** [http://www.uniprot.org/uniprot/P30316 P30316]
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** [http://www.uniprot.org/uniprot/P27727 P27727]
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** [http://www.uniprot.org/uniprot/Q67878 Q67878]
+
−
** [http://www.uniprot.org/uniprot/Q67882 Q67882]
+
−
** [http://www.uniprot.org/uniprot/Q95037 Q95037]
+
−
** [http://www.uniprot.org/uniprot/P30315 P30315]
+
−
** [http://www.uniprot.org/uniprot/P24701 P24701]
+
−
** [http://www.uniprot.org/uniprot/P26811 P26811]
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−
** [http://www.uniprot.org/uniprot/P30319 P30319]
+
−
** [http://www.uniprot.org/uniprot/P33537 P33537]
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** [http://www.uniprot.org/uniprot/P26019 P26019]
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−
** [http://www.uniprot.org/uniprot/P30322 P30322]
+
−
** [http://www.uniprot.org/uniprot/Q05254 Q05254]
+
−
** [http://www.uniprot.org/uniprot/Q07635 Q07635]
+
−
** [http://www.uniprot.org/uniprot/P0ABS8 P0ABS8]
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−
** [http://www.uniprot.org/uniprot/P28631 P28631]
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** [http://www.uniprot.org/uniprot/Q81107 Q81107]
+
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** [http://www.uniprot.org/uniprot/P61875 P61875]
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** [http://www.uniprot.org/uniprot/P34029 P34029]
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** [http://www.uniprot.org/uniprot/P43139 P43139]
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** [http://www.uniprot.org/uniprot/P52431 P52431]
+
−
** [http://www.uniprot.org/uniprot/Q35599 Q35599]
+
−
** [http://www.uniprot.org/uniprot/P30317 P30317]
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** [http://www.uniprot.org/uniprot/Q67952 Q67952]
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** [http://www.uniprot.org/uniprot/Q52851 Q52851]
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** [http://www.uniprot.org/uniprot/P27344 P27344]
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−
** [http://www.uniprot.org/uniprot/P33609 P33609]
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** [http://www.uniprot.org/uniprot/Q67892 Q67892]
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−
** [http://www.uniprot.org/uniprot/P06746 P06746]
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** [http://www.uniprot.org/uniprot/Q37971 Q37971]
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** [http://www.uniprot.org/uniprot/Q38136 Q38136]
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** [http://www.uniprot.org/uniprot/P0A024 P0A024]
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** [http://www.uniprot.org/uniprot/P46957 P46957]
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** [http://www.uniprot.org/uniprot/P13382 P13382]
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** [http://www.uniprot.org/uniprot/P24482 P24482]
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** [http://www.uniprot.org/uniprot/O03684 O03684]
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** [http://www.uniprot.org/uniprot/Q50313 Q50313]
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** [http://www.uniprot.org/uniprot/P87744 P87744]
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** [http://www.uniprot.org/uniprot/Q56366 Q56366]
+
−
** [http://www.uniprot.org/uniprot/Q51334 Q51334]
+
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** [http://www.uniprot.org/uniprot/Q9YKD1 Q9YKD1]
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** [http://www.uniprot.org/uniprot/Q9WNS2 Q9WNS2]
+
−
** [http://www.uniprot.org/uniprot/Q9QAG0 Q9QAG0]
+
−
** [http://www.uniprot.org/uniprot/Q9QAF7 Q9QAF7]
+
−
** [http://www.uniprot.org/uniprot/Q9QAF6 Q9QAF6]
+
−
** [http://www.uniprot.org/uniprot/Q9QAF3 Q9QAF3]
+
−
** [http://www.uniprot.org/uniprot/Q9IF40 Q9IF40]
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−
** [http://www.uniprot.org/uniprot/Q96846 Q96846]
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−
** [http://www.uniprot.org/uniprot/Q67919 Q67919]
+
−
** [http://www.uniprot.org/uniprot/Q67913 Q67913]
+
−
** [http://www.uniprot.org/uniprot/Q67874 Q67874]
+
−
** [http://www.uniprot.org/uniprot/Q8QXQ1 Q8QXQ1]
+
−
** [http://www.uniprot.org/uniprot/Q8QXP7 Q8QXP7]
+
−
** [http://www.uniprot.org/uniprot/Q8JN15 Q8JN15]
+
−
** [http://www.uniprot.org/uniprot/Q8JN11 Q8JN11]
+
−
** [http://www.uniprot.org/uniprot/O56655 O56655]
+
−
** [http://www.uniprot.org/uniprot/O56654 O56654]
+
−
** [http://www.uniprot.org/uniprot/O11885 O11885]
+
−
** [http://www.uniprot.org/uniprot/P72856 P72856]
+
−
** [http://www.uniprot.org/uniprot/P95979 P95979]
+
−
** [http://www.uniprot.org/uniprot/Q55971 Q55971]
+
−
** [http://www.uniprot.org/uniprot/P73507 P73507]
+
−
** [http://www.uniprot.org/uniprot/P46835 P46835]
+
−
** [http://www.uniprot.org/uniprot/Q49008 Q49008]
+
−
** [http://www.uniprot.org/uniprot/Q49056 Q49056]
+
−
** [http://www.uniprot.org/uniprot/Q49086 Q49086]
+
−
** [http://www.uniprot.org/uniprot/O36363 O36363]
+
−
** [http://www.uniprot.org/uniprot/O68045 O68045]
+
−
** [http://www.uniprot.org/uniprot/O48901 O48901]
+
−
** [http://www.uniprot.org/uniprot/P47658 P47658]
+
−
** [http://www.uniprot.org/uniprot/P46387 P46387]
+
−
** [http://www.uniprot.org/uniprot/Q83948 Q83948]
+
−
** [http://www.uniprot.org/uniprot/Q9YZU3 Q9YZU3]
+
−
** [http://www.uniprot.org/uniprot/Q9YZS3 Q9YZS3]
+
−
** [http://www.uniprot.org/uniprot/Q27607 Q27607]
+
−
** [http://www.uniprot.org/uniprot/O18475 O18475]
+
−
** [http://www.uniprot.org/uniprot/Q61493 Q61493]
+
−
** [http://www.uniprot.org/uniprot/Q94636 Q94636]
+
−
** [http://www.uniprot.org/uniprot/Q27152 Q27152]
+
−
** [http://www.uniprot.org/uniprot/Q9YW56 Q9YW56]
+
−
** [http://www.uniprot.org/uniprot/O21376 O21376]
+
−
** [http://www.uniprot.org/uniprot/P33793 P33793]
+
−
** [http://www.uniprot.org/uniprot/O44055 O44055]
+
−
** [http://www.uniprot.org/uniprot/O54376 O54376]
+
−
** [http://www.uniprot.org/uniprot/Q98207 Q98207]
+
−
** [http://www.uniprot.org/uniprot/O57191 O57191]
+
−
** [http://www.uniprot.org/uniprot/O31096 O31096]
+
−
** [http://www.uniprot.org/uniprot/Q9Z618 Q9Z618]
+
−
** [http://www.uniprot.org/uniprot/O59835 O59835]
+
−
** [http://www.uniprot.org/uniprot/O39272 O39272]
+
−
** [http://www.uniprot.org/uniprot/Q9YTQ4 Q9YTQ4]
+
−
** [http://www.uniprot.org/uniprot/P81412 P81412]
+
−
** [http://www.uniprot.org/uniprot/P81409 P81409]
+
−
** [http://www.uniprot.org/uniprot/P03261 P03261]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=DNA polymerase zeta catalytic subunit}}
+
−
{{#set: common name=DNA polymerase alpha catalytic subunit}}
+
−
{{#set: common name=DNA Polymerase Iota}}
+
−
{{#set: ec number=EC-2.7.7.7}}
+
−
{{#set: gene associated=CHC_T00010052001|CHC_T00008362001_1|CHC_T00000882001_1|CHC_T00005795001_1|CHC_T00009322001_1|CHC_T00003199001_1|CHC_T00010052001_1|CHC_T00003762001_1|CHC_T00009322001|CHC_T00002866001_1|CHC_T00001061001_1|CHC_T00007205001_1|CHC_T00005408001_1|CHC_T00008362001|CHC_T00008124001_1}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=original_genome}}
+

Revision as of 16:15, 23 May 2018

Pathway PWY-6964

Reaction(s) found

2 reactions found over 2 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-6964&oldid=16627"