Difference between revisions of "325-BISPHOSPHATE-NUCLEOTIDASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12263 RXN-12263] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=325-BISPHOSPHATE-NUCLEOTIDASE-RXN 325-BISPHOSPHATE-NUCLEOTIDASE-RXN] == * direction: ** LEFT-TO-RIG...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12263 RXN-12263] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=325-BISPHOSPHATE-NUCLEOTIDASE-RXN 325-BISPHOSPHATE-NUCLEOTIDASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** 3'(2'),5'-bisphosphate nucleotidase, SAL3
 +
** 3'(2'),5'-bisphosphate nucleotidase SAL1
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.5.1.103 EC-2.5.1.103]
+
** [http://enzyme.expasy.org/EC/3.1.3.7 EC-3.1.3.7]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[FARNESYL-PP]][c] '''=>''' 1 [[CPD-465]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[3-5-ADP]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[AMP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 (2E,6E)-farnesyl diphosphate[c] '''=>''' 1 presqualene diphosphate[c] '''+''' 1 diphosphate[c]
+
** 1 H2O[c] '''+''' 1 adenosine 3',5'-bisphosphate[c] '''=>''' 1 phosphate[c] '''+''' 1 AMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00001581001_1]]
+
* Gene: [[CHC_T00008454001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
** [[pantograph]]-[[a.taliana]]
+
* Gene: [[CHC_T00008597001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00008808001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00008808001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7072]], hopanoid biosynthesis (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7072 PWY-7072]
 
−
** '''1''' reactions found over '''14''' reactions in the full pathway
 
−
* [[PWY-6767]], 4,4'-diapolycopenedioate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6767 PWY-6767]
 
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5875]], staphyloxanthin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5875 PWY-5875]
 
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6105]], botryococcenes and methylated squalene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6105 PWY-6105]
 
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
*** [[a.taliana]]
+
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10040 10040]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00702 R00702]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00188 R00188]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/O69445 O69445]
+
** [http://www.uniprot.org/uniprot/Q40639 Q40639]
−
** [http://www.uniprot.org/uniprot/P36596 P36596]
+
−
** [http://www.uniprot.org/uniprot/O65688 O65688]
+
−
** [http://www.uniprot.org/uniprot/O23118 O23118]
+
−
** [http://www.uniprot.org/uniprot/O22107 O22107]
+
−
** [http://www.uniprot.org/uniprot/Q40472 Q40472]
+
−
** [http://www.uniprot.org/uniprot/O22106 O22106]
+
−
** [http://www.uniprot.org/uniprot/P53800 P53800]
+
−
** [http://www.uniprot.org/uniprot/P53799 P53799]
+
−
** [http://www.uniprot.org/uniprot/P53798 P53798]
+
−
** [http://www.uniprot.org/uniprot/P29704 P29704]
+
−
** [http://www.uniprot.org/uniprot/Q04903 Q04903]
+
−
** [http://www.uniprot.org/uniprot/Q42761 Q42761]
+
−
** [http://www.uniprot.org/uniprot/Q42760 Q42760]
+
−
** [http://www.uniprot.org/uniprot/P37268 P37268]
+
−
** [http://www.uniprot.org/uniprot/Q02769 Q02769]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.5.1.103}}
+
{{#set: common name=3'(2'),5'-bisphosphate nucleotidase, SAL3}}
−
{{#set: gene associated=CHC_T00001581001_1}}
+
{{#set: common name=3'(2'),5'-bisphosphate nucleotidase SAL1}}
−
{{#set: in pathway=PWY-7072|PWY-6767|PWY-5875|PWY-6105}}
+
{{#set: ec number=EC-3.1.3.7}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: gene associated=CHC_T00008454001_1|CHC_T00008597001|CHC_T00008808001_1|CHC_T00008808001}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
+
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-original_genome|orthology-galdieria.sulphuraria}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:20, 23 May 2018

Reaction 325-BISPHOSPHATE-NUCLEOTIDASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3'(2'),5'-bisphosphate nucleotidase, SAL3
    • 3'(2'),5'-bisphosphate nucleotidase SAL1
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 adenosine 3',5'-bisphosphate[c] => 1 phosphate[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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