Difference between revisions of "DNA-N"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTSEMIALDEHYDROG-RXN GLUTSEMIALDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** g...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DNA-N DNA-N] == * common name: ** DNAn * Synonym(s): ** DNA(N) == Reaction(s) known to consume...")
 
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTSEMIALDEHYDROG-RXN GLUTSEMIALDEHYDROG-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DNA-N DNA-N] ==
* direction:
+
** LEFT-TO-RIGHT
+
 
* common name:
 
* common name:
** glutamate-5-semialdehyde dehydrogenase
+
** DNAn
* ec number:
+
** [http://enzyme.expasy.org/EC/1.2.1.41 EC-1.2.1.41]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** DNA(N)
  
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
* With identifiers:
+
* [[DNA-DIRECTED-DNA-POLYMERASE-RXN]]
** 1 [[L-GLUTAMATE-5-P]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c]
+
* [[3.1.11.2-RXN]]
* With common name(s):
+
* [[RXN0-4961]]
** 1 γ-L-glutamyl 5-phosphate[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 NADP+[c] '''+''' 1 phosphate[c] '''+''' 1 L-glutamate-5-semialdehyde[c]
+
== Reaction(s) known to produce the compound ==
 
+
* [[DNA-DIRECTED-DNA-POLYMERASE-RXN]]
== Genes associated with this reaction  ==
+
* [[3.1.11.2-RXN]]
Genes have been associated with this reaction based on different elements listed below.
+
* [[DNA-LIGASE-ATP-RXN]]
* [[CHC_T00008349001]]
+
== Reaction(s) of unknown directionality ==
** ORIGINAL_GENOME
+
* [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
***AUTOMATED-NAME-MATCH
+
* [[CHC_T00008349001_1]]
+
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** [[pantograph]]-[[a.taliana]]
+
== Pathways  ==
+
* [[PWY-6922]], L-Nδ-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922]
+
** '''4''' reactions found over '''7''' reactions in the full pathway
+
* [[PROSYN-PWY]], L-proline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY]
+
** '''3''' reactions found over '''4''' reactions in the full pathway
+
* [[ARGININE-SYN4-PWY]], L-ornithine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=ARGININE-SYN4-PWY ARGININE-SYN4-PWY]
+
** '''4''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
+
** '''4''' reactions found over '''5''' reactions in the full pathway
+
* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
+
** '''6''' reactions found over '''8''' reactions in the full pathway
+
== Reconstruction information  ==
+
* [[orthology]]:
+
** [[pantograph]]:
+
*** [[galdieria.sulphuraria]]
+
*** [[a.taliana]]
+
* [[annotation]]:
+
** [[pathwaytools]]:
+
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: common name=DNAn}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19541 19541]
+
{{#set: common name=DNA(N)}}
* LIGAND-RXN:
+
{{#set: consumed by=DNA-DIRECTED-DNA-POLYMERASE-RXN|3.1.11.2-RXN|RXN0-4961}}
** [http://www.genome.jp/dbget-bin/www_bget?R03313 R03313]
+
{{#set: produced by=DNA-DIRECTED-DNA-POLYMERASE-RXN|3.1.11.2-RXN|DNA-LIGASE-ATP-RXN}}
* UNIPROT:
+
{{#set: reversible reaction associated=RNA-DIRECTED-DNA-POLYMERASE-RXN}}
** [http://www.uniprot.org/uniprot/Q9JUK8 Q9JUK8]
+
** [http://www.uniprot.org/uniprot/P45121 P45121]
+
** [http://www.uniprot.org/uniprot/P53000 P53000]
+
** [http://www.uniprot.org/uniprot/P07004 P07004]
+
** [http://www.uniprot.org/uniprot/P17857 P17857]
+
** [http://www.uniprot.org/uniprot/P45638 P45638]
+
** [http://www.uniprot.org/uniprot/P54885 P54885]
+
** [http://www.uniprot.org/uniprot/O04226 O04226]
+
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=glutamate-5-semialdehyde dehydrogenase}}
+
{{#set: ec number=EC-1.2.1.41}}
+
{{#set: gene associated=CHC_T00008349001|CHC_T00008349001_1}}
+
{{#set: in pathway=PWY-6922|PROSYN-PWY|ARGININE-SYN4-PWY|PWY-3341|CITRULBIO-PWY}}
+
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
+
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=original_genome}}
+

Latest revision as of 17:33, 23 May 2018

Metabolite DNA-N

  • common name:
    • DNAn
  • Synonym(s):
    • DNA(N)

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links