Difference between revisions of "3PGAREARR-RXN"

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(Created page with "Category:Gene == Gene CHC_T00007020001_1 == * Synonym(s): == Reactions associated == * METHIONINE--TRNA-LIGASE-RXN ** pantograph-galdieria.sulphuraria * RXN...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3PGAREARR-RXN 3PGAREARR-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.or...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene CHC_T00007020001_1 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3PGAREARR-RXN 3PGAREARR-RXN] ==
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* direction:
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** REVERSIBLE
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* ec number:
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** [http://enzyme.expasy.org/EC/5.4.2.12 EC-5.4.2.12]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[METHIONINE--TRNA-LIGASE-RXN]]
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* With identifiers:
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** 1 [[2-PG]][c] '''<=>''' 1 [[G3P]][c]
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* [[RXN-16165]]
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* With common name(s):
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** 1 2-phospho-D-glycerate[c] '''<=>''' 1 3-phospho-D-glycerate[c]
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== Pathways associated ==
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* [[TRNA-CHARGING-PWY]]
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== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00001519001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-arabidopsis_thaliana]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00004490001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00004201001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-arabidopsis_thaliana]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00007707001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-arabidopsis_thaliana]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00000449001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-arabidopsis_thaliana]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00001241001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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== Pathways ==
 +
* [[PWY-1042]], glycolysis IV (plant cytosol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1042 PWY-1042]
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** '''9''' reactions found over '''10''' reactions in the full pathway
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* [[P341-PWY]], glycolysis V (Pyrococcus): [http://metacyc.org/META/NEW-IMAGE?object=P341-PWY P341-PWY]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-2221]], Entner-Doudoroff pathway III (semi-phosphorylative): [http://metacyc.org/META/NEW-IMAGE?object=PWY-2221 PWY-2221]
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** '''4''' reactions found over '''9''' reactions in the full pathway
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* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
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** '''12''' reactions found over '''13''' reactions in the full pathway
 +
* [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS GLYCOLYSIS]
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** '''12''' reactions found over '''12''' reactions in the full pathway
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* [[PWY-6901]], superpathway of glucose and xylose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6901 PWY-6901]
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** '''9''' reactions found over '''12''' reactions in the full pathway
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* [[PWY-7218]], photosynthetic 3-hydroxybutanoate biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7218 PWY-7218]
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** '''7''' reactions found over '''10''' reactions in the full pathway
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* [[P124-PWY]], Bifidobacterium shunt: [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY]
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** '''11''' reactions found over '''15''' reactions in the full pathway
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* [[PWY-6886]], 1-butanol autotrophic biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6886 PWY-6886]
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** '''8''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-5723]], Rubisco shunt: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6142 PWY-6142]
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** '''10''' reactions found over '''14''' reactions in the full pathway
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* [[PWY-5484]], glycolysis II (from fructose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5484 PWY-5484]
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** '''11''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-7124]], ethylene biosynthesis V (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7124 PWY-7124]
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** '''8''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-7003]], glycerol degradation to butanol: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7003 PWY-7003]
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** '''8''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
 +
* Category: [[orthology]]
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** Source: [[orthology-arabidopsis_thaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: reaction associated=METHIONINE--TRNA-LIGASE-RXN|RXN-16165}}
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* RHEA:
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15901 15901]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01518 R01518]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P30792 P30792]
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** [http://www.uniprot.org/uniprot/P52832 P52832]
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** [http://www.uniprot.org/uniprot/P44865 P44865]
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** [http://www.uniprot.org/uniprot/P30798 P30798]
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** [http://www.uniprot.org/uniprot/P62707 P62707]
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** [http://www.uniprot.org/uniprot/P39773 P39773]
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** [http://www.uniprot.org/uniprot/P47669 P47669]
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** [http://www.uniprot.org/uniprot/Q9CEU3 Q9CEU3]
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** [http://www.uniprot.org/uniprot/P56196 P56196]
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** [http://www.uniprot.org/uniprot/Q9JTF2 Q9JTF2]
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** [http://www.uniprot.org/uniprot/Q9PI71 Q9PI71]
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** [http://www.uniprot.org/uniprot/Q9CIM0 Q9CIM0]
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** [http://www.uniprot.org/uniprot/P00950 P00950]
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** [http://www.uniprot.org/uniprot/P18669 P18669]
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** [http://www.uniprot.org/uniprot/P15259 P15259]
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** [http://www.uniprot.org/uniprot/P16290 P16290]
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** [http://www.uniprot.org/uniprot/P35167 P35167]
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** [http://www.uniprot.org/uniprot/P33158 P33158]
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** [http://www.uniprot.org/uniprot/Q06464 Q06464]
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** [http://www.uniprot.org/uniprot/P36623 P36623]
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** [http://www.uniprot.org/uniprot/P35494 P35494]
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** [http://www.uniprot.org/uniprot/P37689 P37689]
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** [http://www.uniprot.org/uniprot/P35493 P35493]
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** [http://www.uniprot.org/uniprot/Q9VAN7 Q9VAN7]
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** [http://www.uniprot.org/uniprot/Q42908 Q42908]
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** [http://www.uniprot.org/uniprot/Q12326 Q12326]
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** [http://www.uniprot.org/uniprot/P53531 P53531]
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** [http://www.uniprot.org/uniprot/P51379 P51379]
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** [http://www.uniprot.org/uniprot/P75167 P75167]
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** [http://www.uniprot.org/uniprot/P72649 P72649]
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** [http://www.uniprot.org/uniprot/P74507 P74507]
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** [http://www.uniprot.org/uniprot/Q49006 Q49006]
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** [http://www.uniprot.org/uniprot/O24246 O24246]
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** [http://www.uniprot.org/uniprot/Q9X519 Q9X519]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-5.4.2.12}}
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{{#set: gene associated=CHC_T00001519001_1|CHC_T00004490001_1|CHC_T00004201001_1|CHC_T00007707001_1|CHC_T00000449001_1|CHC_T00001241001_1}}
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{{#set: in pathway=PWY-1042|P341-PWY|PWY-2221|GLUCONEO-PWY|GLYCOLYSIS|PWY-6901|PWY-7218|P124-PWY|PWY-6886|PWY-5723|PWY-6142|PWY-5484|PWY-7124|PWY-7003}}
 +
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 17:44, 23 May 2018

Reaction 3PGAREARR-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 2-phospho-D-glycerate[c] <=> 1 3-phospho-D-glycerate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-1042, glycolysis IV (plant cytosol): PWY-1042
    • 9 reactions found over 10 reactions in the full pathway
  • P341-PWY, glycolysis V (Pyrococcus): P341-PWY
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-2221, Entner-Doudoroff pathway III (semi-phosphorylative): PWY-2221
    • 4 reactions found over 9 reactions in the full pathway
  • GLUCONEO-PWY, gluconeogenesis I: GLUCONEO-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • GLYCOLYSIS, glycolysis I (from glucose 6-phosphate): GLYCOLYSIS
    • 12 reactions found over 12 reactions in the full pathway
  • PWY-6901, superpathway of glucose and xylose degradation: PWY-6901
    • 9 reactions found over 12 reactions in the full pathway
  • PWY-7218, photosynthetic 3-hydroxybutanoate biosynthesis (engineered): PWY-7218
    • 7 reactions found over 10 reactions in the full pathway
  • P124-PWY, Bifidobacterium shunt: P124-PWY
    • 11 reactions found over 15 reactions in the full pathway
  • PWY-6886, 1-butanol autotrophic biosynthesis (engineered): PWY-6886
    • 8 reactions found over 11 reactions in the full pathway
  • PWY-5723, Rubisco shunt: PWY-5723
    • 10 reactions found over 10 reactions in the full pathway
  • PWY-6142, gluconeogenesis II (Methanobacterium thermoautotrophicum): PWY-6142
    • 10 reactions found over 14 reactions in the full pathway
  • PWY-5484, glycolysis II (from fructose 6-phosphate): PWY-5484
    • 11 reactions found over 11 reactions in the full pathway
  • PWY-7124, ethylene biosynthesis V (engineered): PWY-7124
    • 8 reactions found over 10 reactions in the full pathway
  • PWY-7003, glycerol degradation to butanol: PWY-7003
    • 8 reactions found over 10 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=3PGAREARR-RXN&oldid=17998"