Difference between revisions of "CPD-308"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1147 RXN0-1147] == * direction: ** REVERSIBLE * common name: ** 2-oxoglutarate dehydrogenase,...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-308 CPD-308] == * smiles: ** C([O-])(=O)CCC([N+]C(C(=O)[O-])CCCNC(N)=[N+])C([O-])=O * inchi...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1147 RXN0-1147] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-308 CPD-308] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** C([O-])(=O)CCC([N+]C(C(=O)[O-])CCCNC(N)=[N+])C([O-])=O
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* inchi key:
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** InChIKey=LMKYZBGVKHTLTN-NKWVEPMBSA-M
 
* common name:
 
* common name:
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** 2-oxoglutarate dehydrogenase, E1 component
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** D-nopaline
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** dihydrolipoamide dehydrogenase
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* molecular weight:
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* ec number:
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** 303.294   
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** [http://enzyme.expasy.org/EC/2.3.1.61 EC-2.3.1.61]
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* Synonym(s):
 
* Synonym(s):
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** N2-(D-1,3-dicarboxypropyl)-L-arginine
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[Oxo-glutarate-dehydrogenase-DH-lipoyl]][c] '''+''' 1 [[SUC-COA]][c] '''<=>''' 1 [[Oxo-glutarate-dehydro-suc-DH-lipoyl]][c] '''+''' 1 [[CO-A]][c]
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* [[1.5.1.19-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-dihydrolipoyl-L-lysine[c] '''+''' 1 succinyl-CoA[c] '''<=>''' 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-S-succinyldihydrolipoyl-L-lysine[c] '''+''' 1 coenzyme A[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[CHC_T00008441001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00008441001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00008312001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00010287001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00008312001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00010023001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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== Pathways  ==
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* [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398]
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** '''10''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-5084]], 2-oxoglutarate decarboxylation to succinyl-CoA: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5084 PWY-5084]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[original_genome]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R01940 R01940]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=49791983 49791983]
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** [http://www.genome.jp/dbget-bin/www_bget?R02570 R02570]
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* CHEBI:
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{{#set: direction=REVERSIBLE}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58074 58074]
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{{#set: common name=2-oxoglutarate dehydrogenase, E1 component}}
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* LIGAND-CPD:
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{{#set: common name=dihydrolipoamide dehydrogenase}}
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** [http://www.genome.jp/dbget-bin/www_bget?C01682 C01682]
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{{#set: ec number=EC-2.3.1.61}}
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{{#set: smiles=C([O-])(=O)CCC([N+]C(C(=O)[O-])CCCNC(N)=[N+])C([O-])=O}}
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{{#set: gene associated=CHC_T00008441001|CHC_T00008441001_1|CHC_T00008312001|CHC_T00010287001_1|CHC_T00008312001_1|CHC_T00010023001_1}}
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{{#set: inchi key=InChIKey=LMKYZBGVKHTLTN-NKWVEPMBSA-M}}
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{{#set: in pathway=PWY66-398|PWY-5084}}
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{{#set: common name=D-nopaline}}
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{{#set: reconstruction category=orthology}}
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{{#set: molecular weight=303.294    }}
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{{#set: reconstruction tool=pantograph}}
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{{#set: common name=N2-(D-1,3-dicarboxypropyl)-L-arginine}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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{{#set: produced by=1.5.1.19-RXN}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Revision as of 16:46, 23 May 2018

Metabolite CPD-308

  • smiles:
    • C([O-])(=O)CCC([N+]C(C(=O)[O-])CCCNC(N)=[N+])C([O-])=O
  • inchi key:
    • InChIKey=LMKYZBGVKHTLTN-NKWVEPMBSA-M
  • common name:
    • D-nopaline
  • molecular weight:
    • 303.294
  • Synonym(s):
    • N2-(D-1,3-dicarboxypropyl)-L-arginine

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C([O-])(=O)CCC([N+]C(C(=O)[O-])CCCNC(N)=[N+])C([O-])=O" cannot be used as a page name in this wiki.



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