Difference between revisions of "RXN0-1281"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=THIAMINE THIAMINE] == * smiles: ** CC1([N+](=CSC(CCO)=1)CC2(C=NC(C)=NC(N)=2)) * inchi key: ** I...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1281 RXN0-1281] == * direction: ** LEFT-TO-RIGHT * common name: ** dihydrouridine synthase **...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=THIAMINE THIAMINE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1281 RXN0-1281] ==
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* smiles:
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* direction:
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** CC1([N+](=CSC(CCO)=1)CC2(C=NC(C)=NC(N)=2))
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=JZRWCGZRTZMZEH-UHFFFAOYSA-N
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* common name:
 
* common name:
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** thiamine
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** dihydrouridine synthase
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* molecular weight:
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** similar to tRNA dihydrouridine synthase Dus1p
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** 265.352   
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1 EC-1.1.1]
 
* Synonym(s):
 
* Synonym(s):
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** thiamin
 
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** vitamin B1
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[THIAMIN-PYROPHOSPHOKINASE-RXN]]
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* With identifiers:
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* [[TransportSeed_THIAMINE]]
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** 1 [[NADPH]][c] '''+''' 1 [[tRNA-uridines]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[tRNA-Dihydrouridines]][c] '''+''' 1 [[NADP]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[TransportSeed_THIAMINE]]
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** 1 NADPH[c] '''+''' 1 a uridine in tRNA[c] '''+''' 1 H+[c] '''=>''' 1 a 5,6-dihydrouridine in tRNA[c] '''+''' 1 NADP+[c]
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== Reaction(s) of unknown directionality ==
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* [[ExchangeSeed_THIAMINE]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00004349001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00009368001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00009368001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 67-03-8
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{{#set: direction=LEFT-TO-RIGHT}}
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* CAS : 59-43-8
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{{#set: common name=dihydrouridine synthase}}
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* METABOLIGHTS : MTBLC18385
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{{#set: common name=similar to tRNA dihydrouridine synthase Dus1p}}
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* DRUGBANK : DB00152
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{{#set: ec number=EC-1.1.1}}
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* PUBCHEM:
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{{#set: gene associated=CHC_T00004349001_1|CHC_T00009368001|CHC_T00009368001_1}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=1130 1130]
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{{#set: in pathway=}}
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* HMDB : HMDB00235
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{{#set: reconstruction category=orthology|annotation}}
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* LIGAND-CPD:
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{{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00378 C00378]
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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* CHEMSPIDER:
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** [http://www.chemspider.com/Chemical-Structure.1098.html 1098]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=18385 18385]
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* BIGG : thm
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{{#set: smiles=CC1([N+](=CSC(CCO)=1)CC2(C=NC(C)=NC(N)=2))}}
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{{#set: inchi key=InChIKey=JZRWCGZRTZMZEH-UHFFFAOYSA-N}}
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{{#set: common name=thiamine}}
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{{#set: molecular weight=265.352    }}
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{{#set: common name=thiamin|vitamin B1}}
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{{#set: consumed by=THIAMIN-PYROPHOSPHOKINASE-RXN|TransportSeed_THIAMINE}}
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{{#set: produced by=TransportSeed_THIAMINE}}
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{{#set: consumed or produced by=ExchangeSeed_THIAMINE}}
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Revision as of 17:47, 23 May 2018

Reaction RXN0-1281

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • dihydrouridine synthase
    • similar to tRNA dihydrouridine synthase Dus1p
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN0-1281&oldid=18113"