Difference between revisions of "R344-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7691 RXN-7691] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With id...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R344-RXN R344-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7691 RXN-7691] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R344-RXN R344-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.5.1.17 EC-2.5.1.17]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[WATER]][c] '''+''' 1 [[CPD-7030]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ACET]][c] '''+''' 1 [[ISOBUTYRATE]][c]
+
** 1 [[CPD-694]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[CPD-690]][c] '''+''' 1 [[P3I]][c]
 
* With common name(s):
 
* With common name(s):
** 1 H2O[c] '''+''' 1 β-ketoisocaproate[c] '''=>''' 1 H+[c] '''+''' 1 acetate[c] '''+''' 1 isobutanoate[c]
+
** 1 cob(I)yrinate a,c-diamide[c] '''+''' 1 ATP[c] '''=>''' 1 adenosyl-cobyrinate a,c-diamide[c] '''+''' 1 PPPi[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[CHC_T00002690001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-5075]], L-leucine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5075 PWY-5075]
+
* [[PWY-5509]], adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5509 PWY-5509]
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5508]], adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5508 PWY-5508]
 +
** '''1''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[gap-filling]]:
+
* Category: [[orthology]]
** [[meneco]]:
+
** Source: [[orthology-ectocarpus_siliculosus]]
*** [[added for gapfilling]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11528 11528]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R05220 R05220]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: in pathway=PWY-5075}}
+
{{#set: ec number=EC-2.5.1.17}}
{{#set: reconstruction category=gap-filling}}
+
{{#set: gene associated=CHC_T00002690001_1}}
{{#set: reconstruction tool=meneco}}
+
{{#set: in pathway=PWY-5509|PWY-5508}}
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 16:49, 23 May 2018

Reaction R344-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 cob(I)yrinate a,c-diamide[c] + 1 ATP[c] => 1 adenosyl-cobyrinate a,c-diamide[c] + 1 PPPi[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5509, adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I: PWY-5509
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-5508, adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II: PWY-5508
    • 1 reactions found over 9 reactions in the full pathway

Reconstruction information

External links