Difference between revisions of "RXN-9652"
From metabolic_network
(Created page with "Category:Gene == Gene CHC_T00009142001 == * left end position: ** 59305 * transcription direction: ** POSITIVE * right end position: ** 61233 * centisome position: ** 84.7...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9652 RXN-9652] == * direction: ** LEFT-TO-RIGHT * common name: ** Beta-ketoacyl synthase * ec n...") |
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| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9652 RXN-9652] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
| − | * | + | * common name: |
| − | ** | + | ** Beta-ketoacyl synthase |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86] |
| − | * | + | ** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85] |
| − | ** | + | ** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41] |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * | + | * With identifiers: |
| − | ** | + | ** 1 [[Decanoyl-ACPs]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[3-oxo-dodecanoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] |
| − | + | * With common name(s): | |
| − | + | ** 1 a decanoyl-[acp][c] '''+''' 1 malonyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 coenzyme A[c] '''+''' 1 a 3-oxo-dodecanoyl-[acp][c] '''+''' 1 CO2[c] | |
| − | + | ||
| − | + | == Genes associated with this reaction == | |
| − | + | Genes have been associated with this reaction based on different elements listed below. | |
| − | + | * Gene: [[CHC_T00009465001]] | |
| − | + | ** Source: [[annotation-original_genome]] | |
| − | + | *** Assignment: AUTOMATED-NAME-MATCH | |
| − | + | * Gene: [[CHC_T00009465001_1]] | |
| − | + | ** Source: [[orthology-ectocarpus_siliculosus]] | |
| − | + | == Pathways == | |
| − | + | * [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994] | |
| − | + | ** '''22''' reactions found over '''31''' reactions in the full pathway | |
| − | + | == Reconstruction information == | |
| − | + | * Category: [[orthology]] | |
| − | + | ** Source: [[orthology-ectocarpus_siliculosus]] | |
| − | + | *** Tool: [[pantograph]] | |
| − | + | * Category: [[annotation]] | |
| − | + | ** Source: [[annotation-original_genome]] | |
| − | + | *** Tool: [[pathwaytools]] | |
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| − | * [[ | + | |
| − | ** | + | |
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| − | * [[ | + | |
| − | ** | + | |
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| − | == Pathways | + | |
| − | * [[PWY- | + | |
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| − | * | + | |
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== External links == | == External links == | ||
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=Beta-ketoacyl synthase}} |
| − | {{#set: | + | {{#set: ec number=EC-2.3.1.86}} |
| − | {{#set: | + | {{#set: ec number=EC-2.3.1.85}} |
| − | {{#set: | + | {{#set: ec number=EC-2.3.1.41}} |
| − | {{#set: pathway | + | {{#set: gene associated=CHC_T00009465001|CHC_T00009465001_1}} |
| + | {{#set: in pathway=PWY-5994}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 16:50, 23 May 2018
Contents
Reaction RXN-9652
- direction:
- LEFT-TO-RIGHT
- common name:
- Beta-ketoacyl synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 Decanoyl-ACPs[c] + 1 MALONYL-COA[c] + 1 PROTON[c] => 1 CO-A[c] + 1 3-oxo-dodecanoyl-ACPs[c] + 1 CARBON-DIOXIDE[c]
- With common name(s):
- 1 a decanoyl-[acp][c] + 1 malonyl-CoA[c] + 1 H+[c] => 1 coenzyme A[c] + 1 a 3-oxo-dodecanoyl-[acp][c] + 1 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00009465001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00009465001_1
- Source: orthology-ectocarpus_siliculosus
Pathways
- PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
- 22 reactions found over 31 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
