Difference between revisions of "CHC T00008713001"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17729 RXN-17729] == * direction: ** LEFT-TO-RIGHT * common name: ** 1-acyl-sn-glycerol-3-phosph...")
 
(Created page with "Category:Gene == Gene CHC_T00008713001 == * left end position: ** 149306 * transcription direction: ** POSITIVE * right end position: ** 150223 * centisome position: ** 65...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17729 RXN-17729] ==
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== Gene CHC_T00008713001 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 149306
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* common name:
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* transcription direction:
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** 1-acyl-sn-glycerol-3-phosphate acyltransferase
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** POSITIVE
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** Lysophosphatidic acid acyltransferase
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* right end position:
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* ec number:
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** 150223
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** [http://enzyme.expasy.org/EC/2.3.1.51 EC-2.3.1.51]
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* centisome position:
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** 65.17294   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN]]
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** 1 [[Long-Chain-Acyl-CoAs]][c] '''+''' 1 [[1-Alkyl-glycerol-3-phosphate]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[1-Alkyl-2-acyl-glycerol-3-phosphate]][c]
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** Source: [[annotation-original_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 a long-chain acyl-CoA[c] '''+''' 1 a 1-alkyl-sn-glycerol 3-phosphate[c] '''=>''' 1 coenzyme A[c] '''+''' 1 a 2-acyl-1-alkyl-sn-glycerol 3-phosphate[c]
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* Reaction: [[RXN-15043]]
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** Source: [[annotation-original_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-16025]]
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* [[CHC_T00008713001]]
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** Source: [[annotation-original_genome]]
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** ORIGINAL_GENOME
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*** Assignment: automated-name-match
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN-16032]]
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* [[CHC_T00008526001]]
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** Source: [[annotation-original_genome]]
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** ORIGINAL_GENOME
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*** Assignment: automated-name-match
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN-16066]]
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* [[CHC_T00009396001_1]]
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** Source: [[annotation-original_genome]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** Assignment: automated-name-match
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* [[CHC_T00009195001]]
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* Reaction: [[RXN-16067]]
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** ORIGINAL_GENOME
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** Source: [[annotation-original_genome]]
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***AUTOMATED-NAME-MATCH
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*** Assignment: automated-name-match
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* [[CHC_T00009396001]]
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* Reaction: [[RXN-16076]]
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** ORIGINAL_GENOME
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** Source: [[annotation-original_genome]]
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***AUTOMATED-NAME-MATCH
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*** Assignment: automated-name-match
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* [[CHC_T00008325001]]
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* Reaction: [[RXN-16077]]
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** ORIGINAL_GENOME
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** Source: [[annotation-original_genome]]
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***AUTOMATED-NAME-MATCH
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*** Assignment: automated-name-match
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== Pathways  ==
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* Reaction: [[RXN-16118]]
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* [[PWY-7782]], plasmalogen biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7782 PWY-7782]
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** Source: [[annotation-original_genome]]
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** '''7''' reactions found over '''16''' reactions in the full pathway
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*** Assignment: automated-name-match
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== Reconstruction information  ==
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* Reaction: [[RXN-1623]]
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* [[orthology]]:
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** Source: [[annotation-original_genome]]
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** [[pantograph]]:
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*** Assignment: automated-name-match
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*** [[galdieria.sulphuraria]]
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* Reaction: [[RXN-17008]]
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* [[annotation]]:
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** Source: [[annotation-original_genome]]
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** [[pathwaytools]]:
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*** Assignment: automated-name-match
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*** [[original_genome]]
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* Reaction: [[RXN-17009]]
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** Source: [[annotation-original_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17010]]
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** Source: [[annotation-original_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17011]]
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** Source: [[annotation-original_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17012]]
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** Source: [[annotation-original_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17013]]
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** Source: [[annotation-original_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17014]]
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** Source: [[annotation-original_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17015]]
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** Source: [[annotation-original_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17019]]
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** Source: [[annotation-original_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17020]]
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** Source: [[annotation-original_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17021]]
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** Source: [[annotation-original_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17022]]
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** Source: [[annotation-original_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17023]]
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** Source: [[annotation-original_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17024]]
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** Source: [[annotation-original_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17729]]
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** Source: [[annotation-original_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN0-5514]]
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** Source: [[annotation-original_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN0-6705]]
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** Source: [[annotation-original_genome]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[TRIGLSYN-PWY]]
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* [[PWY-7411]]
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* [[PWY-7589]]
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* [[PWY-7782]]
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* [[PWY-5667]]
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* [[PWY0-1319]]
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* [[PWY-7417]]
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* [[PWY-5981]]
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* [[PWY-7587]]
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* [[PWY-6453]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=149306}}
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{{#set: common name=1-acyl-sn-glycerol-3-phosphate acyltransferase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=Lysophosphatidic acid acyltransferase}}
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{{#set: right end position=150223}}
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{{#set: ec number=EC-2.3.1.51}}
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{{#set: centisome position=65.17294    }}
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{{#set: gene associated=CHC_T00008713001|CHC_T00008526001|CHC_T00009396001_1|CHC_T00009195001|CHC_T00009396001|CHC_T00008325001}}
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{{#set: reaction associated=1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN|RXN-15043|RXN-16025|RXN-16032|RXN-16066|RXN-16067|RXN-16076|RXN-16077|RXN-16118|RXN-1623|RXN-17008|RXN-17009|RXN-17010|RXN-17011|RXN-17012|RXN-17013|RXN-17014|RXN-17015|RXN-17019|RXN-17020|RXN-17021|RXN-17022|RXN-17023|RXN-17024|RXN-17729|RXN0-5514|RXN0-6705}}
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{{#set: in pathway=PWY-7782}}
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{{#set: pathway associated=TRIGLSYN-PWY|PWY-7411|PWY-7589|PWY-7782|PWY-5667|PWY0-1319|PWY-7417|PWY-5981|PWY-7587|PWY-6453}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Revision as of 17:56, 23 May 2018

Gene CHC_T00008713001

  • left end position:
    • 149306
  • transcription direction:
    • POSITIVE
  • right end position:
    • 150223
  • centisome position:
    • 65.17294
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CHC_T00008713001&oldid=18611"