Difference between revisions of "1.2.4.4-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-19148 CPD-19148] == * smiles: ** CCCCCCC=CCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.4.4-RXN 1.2.4.4-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-19148 CPD-19148] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.4.4-RXN 1.2.4.4-RXN] ==
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* smiles:
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* direction:
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** CCCCCCC=CCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
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** REVERSIBLE
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* inchi key:
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* ec number:
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** InChIKey=RCVJZGBRLGUTKT-CGGPSVLLSA-J
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** [http://enzyme.expasy.org/EC/1.2.4.4 EC-1.2.4.4]
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* common name:
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** (5Z)-dodecenoyl-CoA
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−
* molecular weight:
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−
** 943.792   
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* Synonym(s):
 
* Synonym(s):
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** 12:1-Δ5-CoA
 
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** cis-5-tetradecenoyl-CoA
 
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** 12:1(n-7)-CoA
 
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** (5Z)-tetradec-5-enoyl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-17796]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[BCAA-dehydrogenase-lipoyl]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[BCAA-dehydrogenase-2MP-DH-lipoyl]][c]
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* [[RXN-17795]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 3-methyl-2-oxobutanoate[c] '''+''' 1 H+[c] '''+''' 1 an [apo BCAA dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''<=>''' 1 CO2[c] '''+''' 1 an [apo BCAA dehydrogenase E2 protein] N6-S-[2-methylpropanoyl]dihydrolipoyl-L-lysine[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[CHC_T00006349001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00008584001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways  ==
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* [[PWY-5046]], 2-oxoisovalerate decarboxylation to isobutanoyl-CoA: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5046 PWY-5046]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: smiles=CCCCCCC=CCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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* LIGAND-RXN:
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{{#set: inchi key=InChIKey=RCVJZGBRLGUTKT-CGGPSVLLSA-J}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01701 R01701]
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{{#set: common name=(5Z)-dodecenoyl-CoA}}
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* UNIPROT:
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{{#set: molecular weight=943.792    }}
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** [http://www.uniprot.org/uniprot/P21839 P21839]
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{{#set: common name=12:1-&Delta;5-CoA|cis-5-tetradecenoyl-CoA|12:1(n-7)-CoA|(5Z)-tetradec-5-enoyl-CoA}}
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** [http://www.uniprot.org/uniprot/P21953 P21953]
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{{#set: consumed by=RXN-17796}}
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** [http://www.uniprot.org/uniprot/P37940 P37940]
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{{#set: produced by=RXN-17795}}
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** [http://www.uniprot.org/uniprot/Q9PK54 Q9PK54]
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** [http://www.uniprot.org/uniprot/P37941 P37941]
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** [http://www.uniprot.org/uniprot/P11178 P11178]
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** [http://www.uniprot.org/uniprot/P12694 P12694]
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** [http://www.uniprot.org/uniprot/P09061 P09061]
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** [http://www.uniprot.org/uniprot/P09060 P09060]
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** [http://www.uniprot.org/uniprot/P11960 P11960]
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** [http://www.uniprot.org/uniprot/O84344 O84344]
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** [http://www.uniprot.org/uniprot/Q9Z9E8 Q9Z9E8]
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** [http://www.uniprot.org/uniprot/Q9I1M2 Q9I1M2]
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** [http://www.uniprot.org/uniprot/P35738 P35738]
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** [http://www.uniprot.org/uniprot/P50136 P50136]
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** [http://www.uniprot.org/uniprot/O48615 O48615]
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** [http://www.uniprot.org/uniprot/O03849 O03849]
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** [http://www.uniprot.org/uniprot/Q53592 Q53592]
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** [http://www.uniprot.org/uniprot/Q53593 Q53593]
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** [http://www.uniprot.org/uniprot/O82450 O82450]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-1.2.4.4}}
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{{#set: gene associated=CHC_T00006349001_1|CHC_T00008584001_1}}
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{{#set: in pathway=PWY-5046}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 17:58, 23 May 2018

Reaction 1.2.4.4-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5046, 2-oxoisovalerate decarboxylation to isobutanoyl-CoA: PWY-5046
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




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