Difference between revisions of "HOMSUCTRAN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDPREDUCT-RXN GDPREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ribonucleoside-diph...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMSUCTRAN-RXN HOMSUCTRAN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expa...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDPREDUCT-RXN GDPREDUCT-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMSUCTRAN-RXN HOMSUCTRAN-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** ribonucleoside-diphosphate reductase alpha chain
 
−
** ribonucleoside-diphosphate reductase beta chain
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1]
+
** [http://enzyme.expasy.org/EC/2.3.1.46 EC-2.3.1.46]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Red-Thioredoxin]][c] '''+''' 1 [[GDP]][c] '''=>''' 1 [[DGDP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[Ox-Thioredoxin]][c]
+
** 1 [[HOMO-SER]][c] '''+''' 1 [[SUC-COA]][c] '''=>''' 1 [[O-SUCCINYL-L-HOMOSERINE]][c] '''+''' 1 [[CO-A]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a reduced thioredoxin[c] '''+''' 1 GDP[c] '''=>''' 1 dGDP[c] '''+''' 1 H2O[c] '''+''' 1 an oxidized thioredoxin[c]
+
** 1 L-homoserine[c] '''+''' 1 succinyl-CoA[c] '''=>''' 1 O-succinyl-L-homoserine[c] '''+''' 1 coenzyme A[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[CHC_T00008926001]]
 
−
** ORIGINAL_GENOME
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[CHC_T00008926001_1]]
 
−
** [[pantograph]]-[[galdieria.sulphuraria]]
 
−
** [[pantograph]]-[[a.taliana]]
 
−
* [[CHC_T00008864001]]
 
−
** ORIGINAL_GENOME
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[CHC_T00008864001_1]]
 
−
** [[pantograph]]-[[galdieria.sulphuraria]]
 
−
** [[pantograph]]-[[a.taliana]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7222]], guanosine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7222 PWY-7222]
+
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-METSYN-PWY HOMOSER-METSYN-PWY]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7226]], guanosine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7226 PWY-7226]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[gap-filling]]
−
** [[pantograph]]:
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[meneco]]
−
*** [[a.taliana]]
+
**** Comment: [[added for gapfilling]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28030 28030]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22008 22008]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02019 R02019]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01777 R01777]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9PLV2 Q9PLV2]
 +
** [http://www.uniprot.org/uniprot/Q9CEC5 Q9CEC5]
 +
** [http://www.uniprot.org/uniprot/P07623 P07623]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ribonucleoside-diphosphate reductase alpha chain}}
+
{{#set: ec number=EC-2.3.1.46}}
−
{{#set: common name=ribonucleoside-diphosphate reductase beta chain}}
+
{{#set: in pathway=HOMOSER-METSYN-PWY}}
−
{{#set: ec number=EC-1.17.4.1}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: gene associated=CHC_T00008926001|CHC_T00008926001_1|CHC_T00008864001|CHC_T00008864001_1}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: in pathway=PWY-7222|PWY-7226}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=original_genome}}
+

Revision as of 18:00, 23 May 2018

Reaction HOMSUCTRAN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

Reconstruction information

External links




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