Difference between revisions of "Apo-3-methylcrotonoyl-CoA-carbon-dioxide"

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== GEM description ==
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[[Category:Metabolite]]
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== Automatic reconstruction with [http://aureme.genouest.org AuReMe] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Apo-3-methylcrotonoyl-CoA-carbon-dioxide Apo-3-methylcrotonoyl-CoA-carbon-dioxide] ==
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Model summary: [[MEDIA:summary.txt|summary]]
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* common name:
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** an apo-[3-methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)]
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* Synonym(s):
  
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Download '''AuReMe''' Input/Output [LINK OR MEDIA data]
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== Reaction(s) known to consume the compound ==
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* [[6.3.4.11-RXN]]
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The automatic reconstruction of '''' results to a Genome scale [[MEDIA:model.xml|Model]] containing NB_RXN reactions, NB_CPD metabolites, NB_GENE genes and NB_PWY pathways. This GeM was obtained based on the following sources:
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== Reaction(s) known to produce the compound ==
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* Based on annotation data:
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== Reaction(s) of unknown directionality ==
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** Tool: [http://bioinformatics.ai.sri.com/ptools/ Pathway tools]
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== External links  ==
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*** Creation of a metabolic network containing 773 reactions
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{{#set: common name=an apo-[3-methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)]}}
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* Based on orthology data:
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{{#set: consumed by=6.3.4.11-RXN}}
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** Tool: [http://pathtastic.gforge.inria.fr Pantograph]
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*** From template ''GALDIERIA.SULPHURARIA'' creation of a metabolic network containing: 1361 reactions
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*** From template ''A.TALIANA'' creation of a metabolic network containing: 383 reactions
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* Based on expertise:
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*** 73 reaction(s) added
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* Based on gap-filling:
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** Tool: [https://pypi.python.org/pypi/meneco meneco]
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*** 151 reaction(s) added
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[[FILE:venn.png|frameless|border]]
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== Collaborative curation ==  
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* Suggest reactions to add or remove:
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** Download this [[MEDIA:Add_delete_reaction.csv|form]]
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* Suggest new reactions to create and add:
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** Download this [[MEDIA:Reaction_creator.csv|form]]
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* '''Follow the examples given in the form(s) to correctly share your suggestions'''
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* Send the filled form(s) to: CONTACT_MAIL
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Latest revision as of 17:03, 23 May 2018

Metabolite Apo-3-methylcrotonoyl-CoA-carbon-dioxide

  • common name:
    • an apo-[3-methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)]
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"an apo-[3-methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)" cannot be used as a page name in this wiki.
Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=Apo-3-methylcrotonoyl-CoA-carbon-dioxide&oldid=18942"