Difference between revisions of "PWY-5101"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHASERDECARB-RXN PHOSPHASERDECARB-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosp...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHASERDECARB-RXN PHOSPHASERDECARB-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101] ==
−
* direction:
+
−
** LEFT-TO-RIGHT
+
 
* common name:
 
* common name:
−
** Phosphatidylserine decarboxylase
+
** L-isoleucine biosynthesis II
−
* ec number:
+
* taxonomic range:
−
** [http://enzyme.expasy.org/EC/4.1.1.65 EC-4.1.1.65]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183924 TAX-183924]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-224756]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183925 TAX-183925]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-203691 TAX-203691]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183939 TAX-183939]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''4''' reactions found over '''8''' reactions in the full pathway
−
** 1 [[L-1-PHOSPHATIDYL-SERINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[L-1-PHOSPHATIDYL-ETHANOLAMINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* [[ACETOOHBUTSYN-RXN]]
−
* With common name(s):
+
** 3 associated gene(s):
−
** 1 a 3-O-sn-phosphatidyl-L-serine[c] '''+''' 1 H+[c] '''=>''' 1 an L-1-phosphatidylethanolamine[c] '''+''' 1 CO2[c]
+
*** [[CHC_980]]
−
 
+
*** [[CHC_T00002409001_1]]
−
== Genes associated with this reaction  ==
+
*** [[CHC_T00008160001_1]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** 2 reconstruction source(s) associated:
−
* [[CHC_T00008892001]]
+
*** [[orthology-galdieria.sulphuraria]]
−
** ORIGINAL_GENOME
+
*** [[annotation-original_genome]]
−
***AUTOMATED-NAME-MATCH
+
* [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
−
* [[CHC_T00008892001_1]]
+
** 1 associated gene(s):
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
*** [[CHC_T00003864001_1]]
−
== Pathways  ==
+
** 3 reconstruction source(s) associated:
−
* [[PWY-5669]], phosphatidylethanolamine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5669 PWY-5669]
+
*** [[orthology-galdieria.sulphuraria]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
*** [[orthology-arabidopsis_thaliana]]
−
== Reconstruction information  ==
+
*** [[orthology-ectocarpus_siliculosus]]
−
* [[orthology]]:
+
* [[DIHYDROXYMETVALDEHYDRAT-RXN]]
−
** [[pantograph]]:
+
** 1 associated gene(s):
−
*** [[galdieria.sulphuraria]]
+
*** [[CHC_T00009385001_1]]
−
* [[annotation]]:
+
** 3 reconstruction source(s) associated:
−
** [[pathwaytools]]:
+
*** [[orthology-galdieria.sulphuraria]]
−
*** [[original_genome]]
+
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[RXN-7745]]
 +
** 3 associated gene(s):
 +
*** [[CHC_T00009162001_1]]
 +
*** [[CHC_T00009293001_1]]
 +
*** [[CHC_T00008852001_1]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=R-2-METHYLMALATE-DEHYDRATASE-RXN R-2-METHYLMALATE-DEHYDRATASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16062 RXN-16062]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7743 RXN-7743]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7744 RXN-7744]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: common name=L-isoleucine biosynthesis II}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20828 20828]
+
{{#set: taxonomic range=TAX-183924}}
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-224756}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02055 R02055]
+
{{#set: taxonomic range=TAX-183925}}
−
* UNIPROT:
+
{{#set: taxonomic range=TAX-203691}}
−
** [http://www.uniprot.org/uniprot/P0A8K1 P0A8K1]
+
{{#set: taxonomic range=TAX-183939}}
−
** [http://www.uniprot.org/uniprot/P39006 P39006]
+
{{#set: reaction found=4}}
−
** [http://www.uniprot.org/uniprot/P39822 P39822]
+
{{#set: total reaction=8}}
−
** [http://www.uniprot.org/uniprot/Q9ZJN0 Q9ZJN0]
+
{{#set: completion rate=50.0}}
−
** [http://www.uniprot.org/uniprot/O23513 O23513]
+
−
** [http://www.uniprot.org/uniprot/Q9PLM7 Q9PLM7]
+
−
** [http://www.uniprot.org/uniprot/O25911 O25911]
+
−
** [http://www.uniprot.org/uniprot/O84705 O84705]
+
−
** [http://www.uniprot.org/uniprot/Q9Z767 Q9Z767]
+
−
** [http://www.uniprot.org/uniprot/Q9PP76 Q9PP76]
+
−
** [http://www.uniprot.org/uniprot/P43789 P43789]
+
−
** [http://www.uniprot.org/uniprot/Q46192 Q46192]
+
−
** [http://www.uniprot.org/uniprot/P53037 P53037]
+
−
** [http://www.uniprot.org/uniprot/P27465 P27465]
+
−
** [http://www.uniprot.org/uniprot/Q9SZH1 Q9SZH1]
+
−
** [http://www.uniprot.org/uniprot/O14333 O14333]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=Phosphatidylserine decarboxylase}}
+
−
{{#set: ec number=EC-4.1.1.65}}
+
−
{{#set: gene associated=CHC_T00008892001|CHC_T00008892001_1}}
+
−
{{#set: in pathway=PWY-5669}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=original_genome}}
+

Latest revision as of 15:59, 9 January 2019

Pathway PWY-5101

Reaction(s) found

4 reactions found over 8 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-5101&oldid=19657"