Difference between revisions of "PWY-2541"
From metabolic_network
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-33...") |
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[[Category:Pathway]] | [[Category:Pathway]] | ||
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541] == | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541] == | ||
| + | * common name: | ||
| + | ** plant sterol biosynthesis | ||
* taxonomic range: | * taxonomic range: | ||
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-3398] | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-3398] | ||
| − | |||
| − | |||
* Synonym(s): | * Synonym(s): | ||
== Reaction(s) found == | == Reaction(s) found == | ||
| − | ''' | + | '''12''' reactions found over '''36''' reactions in the full pathway |
* [[1.14.13.70-RXN]] | * [[1.14.13.70-RXN]] | ||
** 1 associated gene(s): | ** 1 associated gene(s): | ||
*** [[CHC_T00009303001_1]] | *** [[CHC_T00009303001_1]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| − | |||
*** [[orthology-galdieria.sulphuraria]] | *** [[orthology-galdieria.sulphuraria]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[CYCLOARTENOL-SYNTHASE-RXN]] | * [[CYCLOARTENOL-SYNTHASE-RXN]] | ||
** 2 associated gene(s): | ** 2 associated gene(s): | ||
| Line 20: | Line 20: | ||
*** [[CHC_T00008265001_1]] | *** [[CHC_T00008265001_1]] | ||
** 4 reconstruction source(s) associated: | ** 4 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[CYCLOEUCALENOL-CYCLOISOMERASE-RXN]] | * [[CYCLOEUCALENOL-CYCLOISOMERASE-RXN]] | ||
** 1 associated gene(s): | ** 1 associated gene(s): | ||
*** [[CHC_T00002985001_1]] | *** [[CHC_T00002985001_1]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| − | |||
*** [[orthology-galdieria.sulphuraria]] | *** [[orthology-galdieria.sulphuraria]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[PWY-5670]] | * [[PWY-5670]] | ||
** 0 associated gene: | ** 0 associated gene: | ||
| Line 36: | Line 36: | ||
*** [[CHC_T00003466001_1]] | *** [[CHC_T00003466001_1]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[RXN-4209]] | * [[RXN-4209]] | ||
** 1 associated gene(s): | ** 1 associated gene(s): | ||
*** [[CHC_T00006481001_1]] | *** [[CHC_T00006481001_1]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[RXN-4210]] | * [[RXN-4210]] | ||
** 1 associated gene(s): | ** 1 associated gene(s): | ||
| Line 51: | Line 51: | ||
** 1 reconstruction source(s) associated: | ** 1 reconstruction source(s) associated: | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| + | * [[RXN-4222]] | ||
| + | ** 1 associated gene(s): | ||
| + | *** [[CHC_T00002789001]] | ||
| + | ** 1 reconstruction source(s) associated: | ||
| + | *** [[manual-reactions_to_add_2]] | ||
| + | * [[RXN-4243]] | ||
| + | ** 0 associated gene: | ||
| + | ** 1 reconstruction source(s) associated: | ||
| + | *** [[manual-reactions_to_add_2]] | ||
* [[RXN-707]] | * [[RXN-707]] | ||
** 1 associated gene(s): | ** 1 associated gene(s): | ||
| Line 56: | Line 65: | ||
** 1 reconstruction source(s) associated: | ** 1 reconstruction source(s) associated: | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| + | * [[RXN-708]] | ||
| + | ** 1 associated gene(s): | ||
| + | *** [[CHC_T00002789001]] | ||
| + | ** 1 reconstruction source(s) associated: | ||
| + | *** [[manual-reactions_to_add_2]] | ||
* [[RXN3O-218]] | * [[RXN3O-218]] | ||
** 1 associated gene(s): | ** 1 associated gene(s): | ||
*** [[CHC_T00006481001_1]] | *** [[CHC_T00006481001_1]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
== Reaction(s) not found == | == Reaction(s) not found == | ||
* [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.143-RXN 2.1.1.143-RXN] | * [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.143-RXN 2.1.1.143-RXN] | ||
| Line 83: | Line 97: | ||
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4161 RXN-4161] | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-4161 RXN-4161] | ||
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4221 RXN-4221] | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-4221 RXN-4221] | ||
| − | |||
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4224 RXN-4224] | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-4224 RXN-4224] | ||
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4242 RXN-4242] | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-4242 RXN-4242] | ||
| − | |||
| − | |||
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8352 RXN-8352] | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-8352 RXN-8352] | ||
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8353 RXN-8353] | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-8353 RXN-8353] | ||
| Line 94: | Line 105: | ||
* ARACYC: | * ARACYC: | ||
** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-2541 PWY-2541] | ** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-2541 PWY-2541] | ||
| − | |||
{{#set: common name=plant sterol biosynthesis}} | {{#set: common name=plant sterol biosynthesis}} | ||
| − | {{#set: reaction found= | + | {{#set: taxonomic range=TAX-3398}} |
| + | {{#set: reaction found=12}} | ||
{{#set: total reaction=36}} | {{#set: total reaction=36}} | ||
| − | {{#set: completion rate= | + | {{#set: completion rate=33.0}} |
Latest revision as of 16:01, 9 January 2019
Pathway PWY-2541
- common name:
- plant sterol biosynthesis
- taxonomic range:
- Synonym(s):
Reaction(s) found
12 reactions found over 36 reactions in the full pathway
- 1.14.13.70-RXN
- 1 associated gene(s):
- 2 reconstruction source(s) associated:
- CYCLOARTENOL-SYNTHASE-RXN
- 2 associated gene(s):
- 4 reconstruction source(s) associated:
- CYCLOEUCALENOL-CYCLOISOMERASE-RXN
- 1 associated gene(s):
- 2 reconstruction source(s) associated:
- PWY-5670
- 0 associated gene:
- RXN-4144
- 1 associated gene(s):
- 3 reconstruction source(s) associated:
- RXN-4209
- 1 associated gene(s):
- 3 reconstruction source(s) associated:
- RXN-4210
- 1 associated gene(s):
- 1 reconstruction source(s) associated:
- RXN-4222
- 1 associated gene(s):
- 1 reconstruction source(s) associated:
- RXN-4243
- 0 associated gene:
- 1 reconstruction source(s) associated:
- RXN-707
- 1 associated gene(s):
- 1 reconstruction source(s) associated:
- RXN-708
- 1 associated gene(s):
- 1 reconstruction source(s) associated:
- RXN3O-218
- 1 associated gene(s):
- 3 reconstruction source(s) associated:
Reaction(s) not found
- 2.1.1.143-RXN
- RXN-11925
- RXN-11926
- RXN-11927
- RXN-11928
- RXN-11929
- RXN-11930
- RXN-11931
- RXN-11932
- RXN-11933
- RXN-11934
- RXN-11935
- RXN-11936
- RXN-11937
- RXN-11938
- RXN-11939
- RXN-4021
- RXN-4161
- RXN-4221
- RXN-4224
- RXN-4242
- RXN-8352
- RXN-8353
External links
- PLANTCYC : PWY-2541
- ARACYC:
