Difference between revisions of "1.1.1.39-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.39-RXN 1.1.1.39-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...") |
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== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[MAL]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[ | + | ** 1 [[MAL]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[PYRUVATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 (S)-malate[c] '''+''' 1 NAD+[c] '''=>''' 1 | + | ** 1 (S)-malate[c] '''+''' 1 NAD+[c] '''=>''' 1 pyruvate[c] '''+''' 1 CO2[c] '''+''' 1 NADH[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * [[ | + | * Gene: [[CHC_T00009563001_1]] |
− | ** [[ | + | ** Source: [[orthology-ectocarpus_siliculosus]] |
+ | * Gene: [[CHC_T00008878001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
== Pathways == | == Pathways == | ||
− | |||
− | |||
− | |||
− | |||
* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7384 PWY-7384] | * [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7384 PWY-7384] | ||
** '''5''' reactions found over '''12''' reactions in the full pathway | ** '''5''' reactions found over '''12''' reactions in the full pathway | ||
− | |||
− | |||
* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115] | * [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115] | ||
** '''7''' reactions found over '''9''' reactions in the full pathway | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-3641]], L-carnitine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3641 PWY-3641] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
* [[PWY-7118]], chitin degradation to ethanol: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7118 PWY-7118] | * [[PWY-7118]], chitin degradation to ethanol: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7118 PWY-7118] | ||
** '''4''' reactions found over '''6''' reactions in the full pathway | ** '''4''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-7686]], L-malate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7686 PWY-7686] | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY] | ||
+ | ** '''12''' reactions found over '''13''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * [[orthology]]: | + | * Category: [[orthology]] |
− | ** [[pantograph]]: | + | ** Source: [[orthology-galdieria.sulphuraria]] |
− | *** [[ | + | *** Tool: [[pantograph]] |
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12653 12653] | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12653 12653] | ||
− | |||
− | |||
* UNIPROT: | * UNIPROT: | ||
** [http://www.uniprot.org/uniprot/Q48662 Q48662] | ** [http://www.uniprot.org/uniprot/Q48662 Q48662] | ||
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** [http://www.uniprot.org/uniprot/Q7M1T9 Q7M1T9] | ** [http://www.uniprot.org/uniprot/Q7M1T9 Q7M1T9] | ||
** [http://www.uniprot.org/uniprot/Q9M162 Q9M162] | ** [http://www.uniprot.org/uniprot/Q9M162 Q9M162] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00214 R00214] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
{{#set: ec number=EC-1.1.1.38}} | {{#set: ec number=EC-1.1.1.38}} | ||
{{#set: ec number=EC-1.1.1.39}} | {{#set: ec number=EC-1.1.1.39}} | ||
− | {{#set: gene associated=CHC_T00008878001_1}} | + | {{#set: gene associated=CHC_T00009563001_1|CHC_T00008878001_1}} |
− | {{#set: in pathway=PWY- | + | {{#set: in pathway=PWY-7384|PWY-7115|PWY-3641|PWY-7118|PWY-7686|GLUCONEO-PWY}} |
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
+ | {{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-ectocarpus_siliculosus}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
− |
Latest revision as of 16:01, 9 January 2019
Contents
Reaction 1.1.1.39-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 MAL[c] + 1 NAD[c] => 1 PYRUVATE[c] + 1 CARBON-DIOXIDE[c] + 1 NADH[c]
- With common name(s):
- 1 (S)-malate[c] + 1 NAD+[c] => 1 pyruvate[c] + 1 CO2[c] + 1 NADH[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00009563001_1
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00008878001_1
- Source: orthology-galdieria.sulphuraria
Pathways
- PWY-7384, anaerobic energy metabolism (invertebrates, mitochondrial): PWY-7384
- 5 reactions found over 12 reactions in the full pathway
- PWY-7115, C4 photosynthetic carbon assimilation cycle, NAD-ME type: PWY-7115
- 7 reactions found over 9 reactions in the full pathway
- PWY-3641, L-carnitine degradation III: PWY-3641
- 2 reactions found over 3 reactions in the full pathway
- PWY-7118, chitin degradation to ethanol: PWY-7118
- 4 reactions found over 6 reactions in the full pathway
- PWY-7686, L-malate degradation II: PWY-7686
- 1 reactions found over 1 reactions in the full pathway
- GLUCONEO-PWY, gluconeogenesis I: GLUCONEO-PWY
- 12 reactions found over 13 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
External links
- RHEA:
- UNIPROT:
- LIGAND-RXN: