Difference between revisions of "PWY-2941"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11919 RXN-11919] == * direction: ** LEFT-TO-RIGHT * common name: ** (2E)-5-methylhexa-2,4-dieno...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11919 RXN-11919] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941] ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
 
* common name:
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** (2E)-5-methylhexa-2,4-dienoyl-CoA hydratase
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** L-lysine biosynthesis II
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* ec number:
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* taxonomic range:
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** [http://enzyme.expasy.org/EC/4.2.1 EC-4.2.1]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''6''' reactions found over '''9''' reactions in the full pathway
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** 1 [[WATER]][c] '''+''' 1 [[CPD-12904]][c] '''=>''' 1 [[CPD-12905]][c]
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* [[ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 H2O[c] '''+''' 1 (2E)-5-methylhexa-2,4-dienoyl-CoA[c] '''=>''' 1 3-hydroxy-5-methylhex-4-enoyl-CoA[c]
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*** [[CHC_T00009423001_1]]
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*** [[CHC_T00009423001]]
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== Genes associated with this reaction  ==
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** 4 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-galdieria.sulphuraria]]
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* [[CHC_T00009110001_1]]
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*** [[annotation-original_genome]]
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** [[pantograph]]-[[a.taliana]]
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*** [[orthology-arabidopsis_thaliana]]
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== Pathways  ==
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*** [[orthology-ectocarpus_siliculosus]]
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* [[PWY-6672]], cis-genanyl-CoA degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6672 PWY-6672]
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* [[ASPARTATEKIN-RXN]]
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** '''2''' reactions found over '''9''' reactions in the full pathway
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** 2 associated gene(s):
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== Reconstruction information  ==
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*** [[CHC_T00008550001_1]]
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* [[orthology]]:
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*** [[CHC_T00002228001_1]]
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** [[pantograph]]:
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** 3 reconstruction source(s) associated:
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*** [[a.taliana]]
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*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[DIAMINOPIMDECARB-RXN]]
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** 3 associated gene(s):
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*** [[CHC_T00009352001]]
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*** [[CHC_T00004243001_1]]
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*** [[CHC_T00009352001_1]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[DIAMINOPIMEPIM-RXN]]
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** 1 associated gene(s):
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*** [[CHC_T00004852001_1]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[DIHYDRODIPICSYN-RXN]]
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** 1 associated gene(s):
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*** [[CHC_T00006235001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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* [[RXN-14014]]
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** 1 associated gene(s):
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*** [[CHC_T00003353001_1]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-ectocarpus_siliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.89-RXN 2.3.1.89-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=N-ACETYLDIAMINOPIMELATE-DEACETYLASE-RXN N-ACETYLDIAMINOPIMELATE-DEACETYLASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4822 RXN-4822]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: common name=L-lysine biosynthesis II}}
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** [http://www.genome.jp/dbget-bin/www_bget?R08093 R08093]
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{{#set: taxonomic range=TAX-1239}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=6}}
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{{#set: common name=(2E)-5-methylhexa-2,4-dienoyl-CoA hydratase}}
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{{#set: total reaction=9}}
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{{#set: ec number=EC-4.2.1}}
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{{#set: completion rate=67.0}}
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{{#set: gene associated=CHC_T00009110001_1}}
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{{#set: in pathway=PWY-6672}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=a.taliana}}
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Latest revision as of 16:06, 9 January 2019

Pathway PWY-2941

  • common name:
    • L-lysine biosynthesis II
  • taxonomic range:
  • Synonym(s):

Reaction(s) found

6 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-2941&oldid=19821"