Difference between revisions of "PWY-6538"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIACYLGLYKIN-RXN DIACYLGLYKIN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme....")
 
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIACYLGLYKIN-RXN DIACYLGLYKIN-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6538 PWY-6538] ==
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* direction:
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* common name:
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** LEFT-TO-RIGHT
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** caffeine degradation III (bacteria, via demethylation)
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* ec number:
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* taxonomic range:
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** [http://enzyme.expasy.org/EC/2.7.1.107 EC-2.7.1.107]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* Synonym(s):
 
* Synonym(s):
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** caffeine degradation (bacteria)
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''7''' reactions in the full pathway
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** 1 [[DIACYLGLYCEROL]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[L-PHOSPHATIDATE]][c]
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* [[RXN0-901]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 a 1,2-diacyl-sn-glycerol[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 a 1,2-diacyl-sn-glycerol 3-phosphate[c]
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*** [[CHC_T00006216001_1]]
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*** [[CHC_T00006932001_1]]
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== Genes associated with this reaction  ==
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*** [[CHC_T00000194001_1]]
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Genes have been associated with this reaction based on different elements listed below.
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** 2 reconstruction source(s) associated:
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* [[CHC_T00008540001_1]]
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*** [[orthology-arabidopsis_thaliana]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[orthology-ectocarpus_siliculosus]]
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== Pathways  ==
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* [[XANTHINE-OXIDASE-RXN]]
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* [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7817 PWY-7817]
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** 3 associated gene(s):
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** '''6''' reactions found over '''16''' reactions in the full pathway
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*** [[CHC_T00006216001_1]]
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* [[PWY-7039]], phosphatidate metabolism, as a signaling molecule: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7039 PWY-7039]
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*** [[CHC_T00000194001_1]]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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*** [[CHC_T00006932001_1]]
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== Reconstruction information  ==
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** 2 reconstruction source(s) associated:
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* [[orthology]]:
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*** [[orthology-arabidopsis_thaliana]]
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** [[pantograph]]:
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*** [[orthology-ectocarpus_siliculosus]]
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*** [[galdieria.sulphuraria]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11513 RXN-11513]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11516 RXN-11516]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11517 RXN-11517]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11518 RXN-11518]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13106 RXN-13106]
 
== External links  ==
 
== External links  ==
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* RHEA:
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* LIGAND-MAP:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10272 10272]
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** [http://www.genome.jp/dbget-bin/www_bget?map00232 map00232]
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* LIGAND-RXN:
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* UM-BBD-PWY : caf
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** [http://www.genome.jp/dbget-bin/www_bget?R02240 R02240]
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{{#set: common name=caffeine degradation III (bacteria, via demethylation)}}
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* UNIPROT:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.uniprot.org/uniprot/Q01583 Q01583]
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{{#set: common name=caffeine degradation (bacteria)}}
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** [http://www.uniprot.org/uniprot/P49621 P49621]
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{{#set: reaction found=2}}
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** [http://www.uniprot.org/uniprot/P49619 P49619]
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{{#set: total reaction=7}}
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** [http://www.uniprot.org/uniprot/P51556 P51556]
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{{#set: completion rate=28.999999999999996}}
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** [http://www.uniprot.org/uniprot/Q9JTJ7 Q9JTJ7]
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** [http://www.uniprot.org/uniprot/Q9CGK9 Q9CGK9]
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** [http://www.uniprot.org/uniprot/Q9PIN8 Q9PIN8]
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** [http://www.uniprot.org/uniprot/O08560 O08560]
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** [http://www.uniprot.org/uniprot/P0ABN1 P0ABN1]
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** [http://www.uniprot.org/uniprot/P20192 P20192]
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** [http://www.uniprot.org/uniprot/P23743 P23743]
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** [http://www.uniprot.org/uniprot/Q06119 Q06119]
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** [http://www.uniprot.org/uniprot/Q03603 Q03603]
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** [http://www.uniprot.org/uniprot/Q39017 Q39017]
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** [http://www.uniprot.org/uniprot/Q09103 Q09103]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-2.7.1.107}}
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{{#set: gene associated=CHC_T00008540001_1}}
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{{#set: in pathway=PWY-7817|PWY-7039}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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Latest revision as of 16:06, 9 January 2019

Pathway PWY-6538

  • common name:
    • caffeine degradation III (bacteria, via demethylation)
  • taxonomic range:
  • Synonym(s):
    • caffeine degradation (bacteria)

Reaction(s) found

2 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-6538&oldid=19836"