Difference between revisions of "RXN-13163"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN] == * direction: ** LEFT-...")
 
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13163 RXN-13163] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** deoxyribodipyrimidine photolyase
+
** 3-isopropylmalate dehydratase small subunit
 +
** 3-isopropylmalate dehydratase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.1.99.3 EC-4.1.99.3]
+
** [http://enzyme.expasy.org/EC/4.2.1.33 EC-4.2.1.33]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[DNA-With-Pyrimidine-Dimers]][c] '''=>''' 1 [[DNA-Adjacent-Pyrimidines]][c]
+
** 1 [[2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE]][c] '''<=>''' 1 [[3-CARBOXY-3-HYDROXY-ISOCAPROATE]][c]
 
* With common name(s):
 
* With common name(s):
−
**
+
** 1 (2R,3S)-3-isopropylmalate[c] '''<=>''' 1 (2S)-2-isopropylmalate[c]
 +
 
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00010314001_1]]
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* Gene: [[CHC_T00009087001]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
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** Source: [[annotation-original_genome]]
−
* [[CHC_T00001477001_1]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* Gene: [[CHC_T00009184001_1]]
−
* [[CHC_T00010174001]]
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** Source: [[orthology-galdieria.sulphuraria]]
−
** ORIGINAL_GENOME
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* Gene: [[CHC_T00009087001_1]]
−
***AUTOMATED-NAME-MATCH
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** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00009184001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
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** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
** [[pathwaytools]]:
+
*** Tool: [[pantograph]]
−
*** [[original_genome]]
+
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00034 R00034]
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{{#set: common name=3-isopropylmalate dehydratase small subunit}}
−
* UNIPROT:
+
{{#set: common name=3-isopropylmalate dehydratase}}
−
** [http://www.uniprot.org/uniprot/P12769 P12769]
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{{#set: ec number=EC-4.2.1.33}}
−
** [http://www.uniprot.org/uniprot/Q9JSP8 Q9JSP8]
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{{#set: gene associated=CHC_T00009087001|CHC_T00009184001_1|CHC_T00009087001_1|CHC_T00009184001}}
−
** [http://www.uniprot.org/uniprot/Q9HQ46 Q9HQ46]
+
−
** [http://www.uniprot.org/uniprot/P12768 P12768]
+
−
** [http://www.uniprot.org/uniprot/P27526 P27526]
+
−
** [http://www.uniprot.org/uniprot/P25078 P25078]
+
−
** [http://www.uniprot.org/uniprot/Q43125 Q43125]
+
−
** [http://www.uniprot.org/uniprot/P40115 P40115]
+
−
** [http://www.uniprot.org/uniprot/Q28811 Q28811]
+
−
** [http://www.uniprot.org/uniprot/Q24443 Q24443]
+
−
** [http://www.uniprot.org/uniprot/Q91186 Q91186]
+
−
** [http://www.uniprot.org/uniprot/Q42696 Q42696]
+
−
** [http://www.uniprot.org/uniprot/P05066 P05066]
+
−
** [http://www.uniprot.org/uniprot/O24020 O24020]
+
−
** [http://www.uniprot.org/uniprot/O24374 O24374]
+
−
** [http://www.uniprot.org/uniprot/P00914 P00914]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=deoxyribodipyrimidine photolyase}}
+
−
{{#set: ec number=EC-4.1.99.3}}
+
−
{{#set: gene associated=CHC_T00010314001_1|CHC_T00001477001_1|CHC_T00010174001}}
+
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=original_genome}}
+

Latest revision as of 16:07, 9 January 2019

Reaction RXN-13163

  • direction:
    • REVERSIBLE
  • common name:
    • 3-isopropylmalate dehydratase small subunit
    • 3-isopropylmalate dehydratase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-13163&oldid=19843"