Difference between revisions of "HISTIDINE--TRNA-LIGASE-RXN"

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(Created page with "Category:Gene == Gene CHC_T00008929001 == * left end position: ** 15781 * transcription direction: ** NEGATIVE * right end position: ** 17463 * centisome position: ** 29.8...")
 
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene CHC_T00008929001 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTIDINE--TRNA-LIGASE-RXN HISTIDINE--TRNA-LIGASE-RXN] ==
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* left end position:
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* direction:
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** 15781
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** histidine tRNA synthetase
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* right end position:
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* ec number:
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** 17463
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** [http://enzyme.expasy.org/EC/6.1.1.21 EC-6.1.1.21]
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* centisome position:
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** 29.817104   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ACETOLACTREDUCTOISOM-RXN]]
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* With identifiers:
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** original_genome
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** 1 [[HIS]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[HIS-tRNAs]][c] '''=>''' 1 [[Charged-HIS-tRNAs]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
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***automated-name-match
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* With common name(s):
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* [[ACETOOHBUTREDUCTOISOM-RXN]]
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** 1 L-histidine[c] '''+''' 1 ATP[c] '''+''' 1 a tRNAhis[c] '''=>''' 1 an L-histidyl-[tRNAhis][c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
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** original_genome
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***automated-name-match
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[VALSYN-PWY]]
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* Gene: [[CHC_255]]
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* [[PWY-5103]]
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** Source: [[annotation-original_genome]]
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* [[PWY-7111]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[ILEUSYN-PWY]]
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* Gene: [[CHC_T00004806001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=15781}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17313 17313]
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{{#set: right end position=17463}}
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* UNIPROT:
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{{#set: centisome position=29.817104    }}
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** [http://www.uniprot.org/uniprot/Q9X0H5 Q9X0H5]
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{{#set: reaction associated=ACETOLACTREDUCTOISOM-RXN|ACETOOHBUTREDUCTOISOM-RXN}}
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** [http://www.uniprot.org/uniprot/O58028 O58028]
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{{#set: pathway associated=VALSYN-PWY|PWY-5103|PWY-7111|ILEUSYN-PWY}}
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** [http://www.uniprot.org/uniprot/O67223 O67223]
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** [http://www.uniprot.org/uniprot/Q9ZK27 Q9ZK27]
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** [http://www.uniprot.org/uniprot/Q9PPF4 Q9PPF4]
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** [http://www.uniprot.org/uniprot/P56455 P56455]
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** [http://www.uniprot.org/uniprot/Q58406 Q58406]
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** [http://www.uniprot.org/uniprot/O32039 O32039]
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** [http://www.uniprot.org/uniprot/O51160 O51160]
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** [http://www.uniprot.org/uniprot/O66522 O66522]
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** [http://www.uniprot.org/uniprot/Q9ZDL9 Q9ZDL9]
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** [http://www.uniprot.org/uniprot/Q9JUZ9 Q9JUZ9]
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** [http://www.uniprot.org/uniprot/Q9CE78 Q9CE78]
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** [http://www.uniprot.org/uniprot/P47281 P47281]
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** [http://www.uniprot.org/uniprot/O34459 O34459]
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** [http://www.uniprot.org/uniprot/O83647 O83647]
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** [http://www.uniprot.org/uniprot/O84547 O84547]
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** [http://www.uniprot.org/uniprot/Q9Z7P1 Q9Z7P1]
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** [http://www.uniprot.org/uniprot/P43823 P43823]
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** [http://www.uniprot.org/uniprot/Q61035 Q61035]
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** [http://www.uniprot.org/uniprot/P30053 P30053]
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** [http://www.uniprot.org/uniprot/P46696 P46696]
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** [http://www.uniprot.org/uniprot/P51348 P51348]
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** [http://www.uniprot.org/uniprot/P75069 P75069]
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** [http://www.uniprot.org/uniprot/Q55653 Q55653]
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** [http://www.uniprot.org/uniprot/Q49027 Q49027]
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** [http://www.uniprot.org/uniprot/P07263 P07263]
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** [http://www.uniprot.org/uniprot/P60906 P60906]
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** [http://www.uniprot.org/uniprot/P12081 P12081]
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** [http://www.uniprot.org/uniprot/P93422 P93422]
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** [http://www.uniprot.org/uniprot/O82413 O82413]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R03655 R03655]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=histidine tRNA synthetase}}
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{{#set: ec number=EC-6.1.1.21}}
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{{#set: gene associated=CHC_255|CHC_T00004806001_1}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 15:08, 9 January 2019

Reaction HISTIDINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • histidine tRNA synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-histidine[c] + 1 ATP[c] + 1 a tRNAhis[c] => 1 an L-histidyl-[tRNAhis][c] + 1 AMP[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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