Difference between revisions of "HISTIDINE--TRNA-LIGASE-RXN"

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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8872 RXN-8872] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTIDINE--TRNA-LIGASE-RXN HISTIDINE--TRNA-LIGASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** histidine tRNA synthetase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.14.14.1 EC-1.14.14.1]
+
** [http://enzyme.expasy.org/EC/6.1.1.21 EC-6.1.1.21]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[Red-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[4-HYDROXYBENZALDEHYDE]][c] '''=>''' 1 [[Ox-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[CPD-7616]][c]
+
** 1 [[HIS]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[HIS-tRNAs]][c] '''=>''' 1 [[Charged-HIS-tRNAs]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 oxygen[c] '''+''' 1 a reduced [NADPH-hemoprotein reductase][c] '''+''' 1 4-hydroxybenzaldehyde[c] '''=>''' 1 an oxidized [NADPH-hemoprotein reductase][c] '''+''' 1 H2O[c] '''+''' 1 3,4-dihydroxybenzaldehyde[c]
+
** 1 L-histidine[c] '''+''' 1 ATP[c] '''+''' 1 a tRNAhis[c] '''=>''' 1 an L-histidyl-[tRNAhis][c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00009144001_1]]
+
* Gene: [[CHC_255]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[annotation-original_genome]]
−
* [[CHC_T00008799001_1]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
* Gene: [[CHC_T00004806001_1]]
−
* [[CHC_T00008302001_1]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5665]], vanillin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5665 PWY-5665]
+
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
−
* [[PWY-7826]], Amaryllidacea alkaloids biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7826 PWY-7826]
+
−
** '''1''' reactions found over '''25''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17313 17313]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9X0H5 Q9X0H5]
 +
** [http://www.uniprot.org/uniprot/O58028 O58028]
 +
** [http://www.uniprot.org/uniprot/O67223 O67223]
 +
** [http://www.uniprot.org/uniprot/Q9ZK27 Q9ZK27]
 +
** [http://www.uniprot.org/uniprot/Q9PPF4 Q9PPF4]
 +
** [http://www.uniprot.org/uniprot/P56455 P56455]
 +
** [http://www.uniprot.org/uniprot/Q58406 Q58406]
 +
** [http://www.uniprot.org/uniprot/O32039 O32039]
 +
** [http://www.uniprot.org/uniprot/O51160 O51160]
 +
** [http://www.uniprot.org/uniprot/O66522 O66522]
 +
** [http://www.uniprot.org/uniprot/Q9ZDL9 Q9ZDL9]
 +
** [http://www.uniprot.org/uniprot/Q9JUZ9 Q9JUZ9]
 +
** [http://www.uniprot.org/uniprot/Q9CE78 Q9CE78]
 +
** [http://www.uniprot.org/uniprot/P47281 P47281]
 +
** [http://www.uniprot.org/uniprot/O34459 O34459]
 +
** [http://www.uniprot.org/uniprot/O83647 O83647]
 +
** [http://www.uniprot.org/uniprot/O84547 O84547]
 +
** [http://www.uniprot.org/uniprot/Q9Z7P1 Q9Z7P1]
 +
** [http://www.uniprot.org/uniprot/P43823 P43823]
 +
** [http://www.uniprot.org/uniprot/Q61035 Q61035]
 +
** [http://www.uniprot.org/uniprot/P30053 P30053]
 +
** [http://www.uniprot.org/uniprot/P46696 P46696]
 +
** [http://www.uniprot.org/uniprot/P51348 P51348]
 +
** [http://www.uniprot.org/uniprot/P75069 P75069]
 +
** [http://www.uniprot.org/uniprot/Q55653 Q55653]
 +
** [http://www.uniprot.org/uniprot/Q49027 Q49027]
 +
** [http://www.uniprot.org/uniprot/P07263 P07263]
 +
** [http://www.uniprot.org/uniprot/P60906 P60906]
 +
** [http://www.uniprot.org/uniprot/P12081 P12081]
 +
** [http://www.uniprot.org/uniprot/P93422 P93422]
 +
** [http://www.uniprot.org/uniprot/O82413 O82413]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03655 R03655]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-1.14.14.1}}
+
{{#set: common name=histidine tRNA synthetase}}
−
{{#set: gene associated=CHC_T00009144001_1|CHC_T00008799001_1|CHC_T00008302001_1}}
+
{{#set: ec number=EC-6.1.1.21}}
−
{{#set: in pathway=PWY-5665|PWY-7826}}
+
{{#set: gene associated=CHC_255|CHC_T00004806001_1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=TRNA-CHARGING-PWY}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+
{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 16:08, 9 January 2019

Reaction HISTIDINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • histidine tRNA synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-histidine[c] + 1 ATP[c] + 1 a tRNAhis[c] => 1 an L-histidyl-[tRNAhis][c] + 1 AMP[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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