Difference between revisions of "RXN-15378"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6281 PWY-6281] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6281 PWY-6281] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15378 RXN-15378] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
+
** LEFT-TO-RIGHT
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
+
 
* common name:
 
* common name:
−
** L-selenocysteine biosynthesis II (archaea and eukaryotes)
+
** succinate dehydrogenase (Complex II) flavoprotein subunit precursor
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.3.5.1 EC-1.3.5.1]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
* '''2''' reaction(s) found
+
* With identifiers:
−
** [[RXN0-2161]]
+
** 1 [[SUC]][c] '''+''' 1 [[CPD-9612]][c] '''=>''' 1 [[CPD-15301]][c] '''+''' 1 [[FUM]][c]
−
** [[2.7.9.3-RXN]]
+
* With common name(s):
−
== Reaction(s) not found ==
+
** 1 succinate[c] '''+''' 1 caldariellaquinone[c] '''=>''' 1 caldariellaquinol[c] '''+''' 1 fumarate[c]
−
* '''2''' reaction(s) not found
+
 
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-10038 RXN-10038]
+
== Genes associated with this reaction ==
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-10039 RXN-10039]
+
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[CHC_T00008943001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00006990001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00007286001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00008943001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00001817001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00007584001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-MAP:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.genome.jp/dbget-bin/www_bget?map00970 map00970]
+
{{#set: common name=succinate dehydrogenase (Complex II) flavoprotein subunit precursor}}
−
{{#set: taxonomic range=TAX-2759}}
+
{{#set: ec number=EC-1.3.5.1}}
−
{{#set: taxonomic range=TAX-2157}}
+
{{#set: gene associated=CHC_T00008943001|CHC_T00006990001_1|CHC_T00007286001_1|CHC_T00008943001_1|CHC_T00001817001_1|CHC_T00007584001_1}}
−
{{#set: common name=L-selenocysteine biosynthesis II (archaea and eukaryotes)}}
+
{{#set: in pathway=}}
−
{{#set: reaction found=2}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reaction not found=2}}
+
{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 15:09, 9 January 2019

Reaction RXN-15378

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • succinate dehydrogenase (Complex II) flavoprotein subunit precursor
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 succinate[c] + 1 caldariellaquinone[c] => 1 caldariellaquinol[c] + 1 fumarate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-15378&oldid=19891"