Difference between revisions of "SPONTPRO-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7255 PWY-7255] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-28221 TAX-2...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7255 PWY-7255] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPONTPRO-RXN SPONTPRO-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-28221 TAX-28221]
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1236 TAX-1236]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-28216 TAX-28216]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-28211 TAX-28211]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-976 TAX-976]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
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* common name:
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** ergothioneine biosynthesis I (bacteria)
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''1''' reaction(s) found
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* With identifiers:
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** [[GLUTCYSLIG-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''<=>''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c]
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== Reaction(s) not found ==
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* With common name(s):
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* '''6''' reaction(s) not found
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** 1 H+[c] '''+''' 1 H2O[c] '''+''' 1 (S)-1-pyrroline-5-carboxylate[c] '''<=>''' 1 L-glutamate-5-semialdehyde[c]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-18089 RXN-18089]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-18088 RXN-18088]
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== Genes associated with this reaction  ==
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-15804 RXN-15804]
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== Pathways  ==
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-14430 RXN-14430]
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* [[PROSYN-PWY]], L-proline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-14431 RXN-14431]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-14429 RXN-14429]
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* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
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** '''6''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6922]], L-N&delta;-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7770]], indolmycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7770 PWY-7770]
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** '''1''' reactions found over '''10''' reactions in the full pathway
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* [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6344]], L-ornithine degradation II (Stickland reaction): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344]
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** '''3''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6853]], ethylene biosynthesis II (microbes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6853 PWY-6853]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-4981]], L-proline biosynthesis II (from arginine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4981 PWY-4981]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[PROUT-PWY]], L-proline degradation: [http://metacyc.org/META/NEW-IMAGE?object=PROUT-PWY PROUT-PWY]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[gap-filling]]
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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*** Tool: [[meneco]]
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**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-28221}}
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* RHEA:
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{{#set: taxonomic range=TAX-1236}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28234 28234]
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{{#set: taxonomic range=TAX-28216}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-28211}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03314 R03314]
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{{#set: taxonomic range=TAX-976}}
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{{#set: direction=REVERSIBLE}}
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{{#set: taxonomic range=TAX-1117}}
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{{#set: in pathway=PROSYN-PWY|CITRULBIO-PWY|PWY-6922|PWY-7770|ARG-PRO-PWY|PWY-6344|PWY-6853|PWY-3341|PWY-4981|PROUT-PWY}}
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{{#set: taxonomic range=TAX-201174}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: common name=ergothioneine biosynthesis I (bacteria)}}
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{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
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{{#set: reaction found=1}}
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{{#set: reconstruction tool=meneco}}
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{{#set: reaction not found=6}}
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{{#set: reconstruction comment=added for gapfilling}}

Latest revision as of 16:09, 9 January 2019

Reaction SPONTPRO-RXN

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PROSYN-PWY, L-proline biosynthesis I: PROSYN-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • CITRULBIO-PWY, L-citrulline biosynthesis: CITRULBIO-PWY
    • 6 reactions found over 8 reactions in the full pathway
  • PWY-6922, L-Nδ-acetylornithine biosynthesis: PWY-6922
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-7770, indolmycin biosynthesis: PWY-7770
    • 1 reactions found over 10 reactions in the full pathway
  • ARG-PRO-PWY, L-arginine degradation VI (arginase 2 pathway): ARG-PRO-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6344, L-ornithine degradation II (Stickland reaction): PWY-6344
    • 3 reactions found over 9 reactions in the full pathway
  • PWY-6853, ethylene biosynthesis II (microbes): PWY-6853
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-3341, L-proline biosynthesis III: PWY-3341
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-4981, L-proline biosynthesis II (from arginine): PWY-4981
    • 5 reactions found over 6 reactions in the full pathway
  • PROUT-PWY, L-proline degradation: PROUT-PWY
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=SPONTPRO-RXN&oldid=19898"