Difference between revisions of "RXN-12726"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=OHBUTYRYL-COA-EPIM-RXN OHBUTYRYL-COA-EPIM-RXN] == * direction: ** REVERSIBLE * ec number: ** [http:...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12726 RXN-12726] == |
* direction: | * direction: | ||
| − | ** | + | ** LEFT-TO-RIGHT |
| + | * common name: | ||
| + | ** Cysteine synthase CYS1 | ||
* ec number: | * ec number: | ||
| − | ** [http://enzyme.expasy.org/EC/5.1. | + | ** [http://enzyme.expasy.org/EC/2.5.1.47 EC-2.5.1.47] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[ACETYLSERINE]][c] '''+''' 1 [[CPD-678]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[L-SELENOCYSTEINE]][c] '''+''' 1 [[ACET]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 O-acetyl-L-serine[c] '''+''' 1 hydrogen selenide[c] '''=>''' 1 H+[c] '''+''' 1 L-selenocysteine[c] '''+''' 1 acetate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[CHC_T00008842001_1]] |
| − | ** [[ | + | ** Source: [[orthology-ectocarpus_siliculosus]] |
| − | * [[ | + | ** Source: [[orthology-arabidopsis_thaliana]] |
| − | ** [[ | + | * Gene: [[CHC_T00008705001_1]] |
| + | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| + | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| + | * Gene: [[CHC_T00008705001]] | ||
| + | ** Source: [[annotation-original_genome]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
== Pathways == | == Pathways == | ||
| − | * [[PWY- | + | * [[PWY-6936]], seleno-amino acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6936 PWY-6936] |
| − | ** ''' | + | ** '''4''' reactions found over '''5''' reactions in the full pathway |
| − | + | ||
| − | + | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]]: | + | * Category: [[orthology]] |
| − | ** [[pantograph]]: | + | ** Source: [[orthology-galdieria.sulphuraria]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
| + | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-original_genome]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | + | {{#set: direction=LEFT-TO-RIGHT}} | |
| − | + | {{#set: common name=Cysteine synthase CYS1}} | |
| − | + | {{#set: ec number=EC-2.5.1.47}} | |
| − | + | {{#set: gene associated=CHC_T00008842001_1|CHC_T00008705001_1|CHC_T00008705001}} | |
| − | {{#set: | + | {{#set: in pathway=PWY-6936}} |
| − | {{#set: ec number=EC-5.1. | + | {{#set: reconstruction category=orthology|annotation}} |
| − | {{#set: gene associated= | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}} |
| − | {{#set: in pathway=PWY- | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
| − | {{#set: reconstruction category=orthology}} | + | |
| − | {{#set: reconstruction | + | |
| − | {{#set: reconstruction | + | |
Latest revision as of 15:12, 9 January 2019
Contents
Reaction RXN-12726
- direction:
- LEFT-TO-RIGHT
- common name:
- Cysteine synthase CYS1
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 ACETYLSERINE[c] + 1 CPD-678[c] => 1 PROTON[c] + 1 L-SELENOCYSTEINE[c] + 1 ACET[c]
- With common name(s):
- 1 O-acetyl-L-serine[c] + 1 hydrogen selenide[c] => 1 H+[c] + 1 L-selenocysteine[c] + 1 acetate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00008842001_1
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-arabidopsis_thaliana
- Gene: CHC_T00008705001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-arabidopsis_thaliana
- Gene: CHC_T00008705001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
Pathways
- PWY-6936, seleno-amino acid biosynthesis: PWY-6936
- 4 reactions found over 5 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
